Protein–RNA interactions for Protein: Q9D3I8

Rhox4a, Reproductive homeobox 4A, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4aQ9D3I8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Rhox4aQ9D3I8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rhox4aQ9D3I8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Rhox4aQ9D3I8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Rhox4aQ9D3I8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rhox4aQ9D3I8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rhox4aQ9D3I8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rhox4aQ9D3I8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rhox4aQ9D3I8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rhox4aQ9D3I8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rhox4aQ9D3I8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rhox4aQ9D3I8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.03■■□□□ 1.12
Rhox4aQ9D3I8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
Rhox4aQ9D3I8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rhox4aQ9D3I8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22■■□□□ 1.11
Rhox4aQ9D3I8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rhox4aQ9D3I8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rhox4aQ9D3I8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rhox4aQ9D3I8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
Rhox4aQ9D3I8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rhox4aQ9D3I8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rhox4aQ9D3I8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rhox4aQ9D3I8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rhox4aQ9D3I8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rhox4aQ9D3I8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rhox4aQ9D3I8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rhox4aQ9D3I8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rhox4aQ9D3I8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.86■■□□□ 1.09
Rhox4aQ9D3I8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rhox4aQ9D3I8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.83■■□□□ 1.09
Rhox4aQ9D3I8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rhox4aQ9D3I8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rhox4aQ9D3I8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rhox4aQ9D3I8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Rhox4aQ9D3I8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rhox4aQ9D3I8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rhox4aQ9D3I8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rhox4aQ9D3I8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rhox4aQ9D3I8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rhox4aQ9D3I8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.71■■□□□ 1.07
Rhox4aQ9D3I8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Rhox4aQ9D3I8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rhox4aQ9D3I8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Rhox4aQ9D3I8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Rhox4aQ9D3I8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rhox4aQ9D3I8 Gm27325-201ENSMUST00000175467 74 ntBASIC21.66■■□□□ 1.06
Rhox4aQ9D3I8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rhox4aQ9D3I8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rhox4aQ9D3I8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Rhox4aQ9D3I8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rhox4aQ9D3I8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rhox4aQ9D3I8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rhox4aQ9D3I8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rhox4aQ9D3I8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rhox4aQ9D3I8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rhox4aQ9D3I8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rhox4aQ9D3I8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rhox4aQ9D3I8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Rhox4aQ9D3I8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rhox4aQ9D3I8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rhox4aQ9D3I8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rhox4aQ9D3I8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.42■■□□□ 1.02
Rhox4aQ9D3I8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rhox4aQ9D3I8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rhox4aQ9D3I8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rhox4aQ9D3I8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rhox4aQ9D3I8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.4■■□□□ 1.02
Rhox4aQ9D3I8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rhox4aQ9D3I8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rhox4aQ9D3I8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rhox4aQ9D3I8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.36■■□□□ 1.01
Rhox4aQ9D3I8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rhox4aQ9D3I8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.34■■□□□ 1.01
Rhox4aQ9D3I8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rhox4aQ9D3I8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rhox4aQ9D3I8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.29■■□□□ 1
Rhox4aQ9D3I8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rhox4aQ9D3I8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rhox4aQ9D3I8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Rhox4aQ9D3I8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rhox4aQ9D3I8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rhox4aQ9D3I8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rhox4aQ9D3I8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rhox4aQ9D3I8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rhox4aQ9D3I8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rhox4aQ9D3I8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rhox4aQ9D3I8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rhox4aQ9D3I8 Gm25238-201ENSMUST00000174914 89 ntBASIC21.23■□□□□ 0.99
Rhox4aQ9D3I8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rhox4aQ9D3I8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Rhox4aQ9D3I8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.21■□□□□ 0.99
Rhox4aQ9D3I8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Rhox4aQ9D3I8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rhox4aQ9D3I8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rhox4aQ9D3I8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rhox4aQ9D3I8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rhox4aQ9D3I8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rhox4aQ9D3I8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rhox4aQ9D3I8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rhox4aQ9D3I8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms