Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.54■■□□□ 1.68
Chaf1bQ9D0N7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Chaf1bQ9D0N7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Chaf1bQ9D0N7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Chaf1bQ9D0N7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Chaf1bQ9D0N7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Chaf1bQ9D0N7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Chaf1bQ9D0N7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.41■■□□□ 1.66
Chaf1bQ9D0N7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Chaf1bQ9D0N7 Gm27325-201ENSMUST00000175467 74 ntBASIC25.33■■□□□ 1.65
Chaf1bQ9D0N7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.33■■□□□ 1.64
Chaf1bQ9D0N7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Chaf1bQ9D0N7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Chaf1bQ9D0N7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Chaf1bQ9D0N7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Chaf1bQ9D0N7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Chaf1bQ9D0N7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.18■■□□□ 1.62
Chaf1bQ9D0N7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Chaf1bQ9D0N7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.14■■□□□ 1.61
Chaf1bQ9D0N7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Chaf1bQ9D0N7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.12■■□□□ 1.61
Chaf1bQ9D0N7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
Chaf1bQ9D0N7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Chaf1bQ9D0N7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Chaf1bQ9D0N7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Chaf1bQ9D0N7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Chaf1bQ9D0N7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Chaf1bQ9D0N7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Chaf1bQ9D0N7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Chaf1bQ9D0N7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Chaf1bQ9D0N7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.95■■□□□ 1.59
Chaf1bQ9D0N7 Gm25238-201ENSMUST00000174914 89 ntBASIC24.92■■□□□ 1.58
Chaf1bQ9D0N7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.89■■□□□ 1.58
Chaf1bQ9D0N7 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.89■■□□□ 1.57
Chaf1bQ9D0N7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Chaf1bQ9D0N7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
Chaf1bQ9D0N7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.86■■□□□ 1.57
Chaf1bQ9D0N7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Chaf1bQ9D0N7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Chaf1bQ9D0N7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Chaf1bQ9D0N7 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.8■■□□□ 1.56
Chaf1bQ9D0N7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Chaf1bQ9D0N7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Chaf1bQ9D0N7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Chaf1bQ9D0N7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.77■■□□□ 1.56
Chaf1bQ9D0N7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Chaf1bQ9D0N7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Chaf1bQ9D0N7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Chaf1bQ9D0N7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Chaf1bQ9D0N7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Chaf1bQ9D0N7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.71■■□□□ 1.55
Chaf1bQ9D0N7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.71■■□□□ 1.55
Chaf1bQ9D0N7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
Chaf1bQ9D0N7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
Chaf1bQ9D0N7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Chaf1bQ9D0N7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Chaf1bQ9D0N7 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.66■■□□□ 1.54
Chaf1bQ9D0N7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.53
Chaf1bQ9D0N7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Chaf1bQ9D0N7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Chaf1bQ9D0N7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Chaf1bQ9D0N7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Chaf1bQ9D0N7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Chaf1bQ9D0N7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Chaf1bQ9D0N7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Chaf1bQ9D0N7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
Chaf1bQ9D0N7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Chaf1bQ9D0N7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Chaf1bQ9D0N7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Chaf1bQ9D0N7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Chaf1bQ9D0N7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.49■■□□□ 1.51
Chaf1bQ9D0N7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.49■■□□□ 1.51
Chaf1bQ9D0N7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Chaf1bQ9D0N7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.44■■□□□ 1.5
Chaf1bQ9D0N7 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Chaf1bQ9D0N7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
Chaf1bQ9D0N7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Chaf1bQ9D0N7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
Chaf1bQ9D0N7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Chaf1bQ9D0N7 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Chaf1bQ9D0N7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Chaf1bQ9D0N7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Chaf1bQ9D0N7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Chaf1bQ9D0N7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.36■■□□□ 1.49
Chaf1bQ9D0N7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Chaf1bQ9D0N7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.35■■□□□ 1.49
Chaf1bQ9D0N7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Chaf1bQ9D0N7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Chaf1bQ9D0N7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.34■■□□□ 1.49
Chaf1bQ9D0N7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Chaf1bQ9D0N7 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Chaf1bQ9D0N7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.29■■□□□ 1.48
Chaf1bQ9D0N7 Rab21-202ENSMUST00000218831 843 ntBASIC24.29■■□□□ 1.48
Chaf1bQ9D0N7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Chaf1bQ9D0N7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Chaf1bQ9D0N7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
Chaf1bQ9D0N7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Chaf1bQ9D0N7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Chaf1bQ9D0N7 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Chaf1bQ9D0N7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.23■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms