Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chchd1Q9CQA6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chchd1Q9CQA6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chchd1Q9CQA6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chchd1Q9CQA6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chchd1Q9CQA6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chchd1Q9CQA6 Gm15045-201ENSMUST00000117359 883 ntBASIC20.58■□□□□ 0.89
Chchd1Q9CQA6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chchd1Q9CQA6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chchd1Q9CQA6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chchd1Q9CQA6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chchd1Q9CQA6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chchd1Q9CQA6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Chchd1Q9CQA6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Chchd1Q9CQA6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chchd1Q9CQA6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Chchd1Q9CQA6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Chchd1Q9CQA6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chchd1Q9CQA6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chchd1Q9CQA6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Chchd1Q9CQA6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.36■□□□□ 0.85
Chchd1Q9CQA6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chchd1Q9CQA6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.34■□□□□ 0.85
Chchd1Q9CQA6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chchd1Q9CQA6 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.33■□□□□ 0.85
Chchd1Q9CQA6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chchd1Q9CQA6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chchd1Q9CQA6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chchd1Q9CQA6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Chchd1Q9CQA6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chchd1Q9CQA6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chchd1Q9CQA6 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.25■□□□□ 0.83
Chchd1Q9CQA6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chchd1Q9CQA6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chchd1Q9CQA6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chchd1Q9CQA6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Chchd1Q9CQA6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chchd1Q9CQA6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chchd1Q9CQA6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chchd1Q9CQA6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chchd1Q9CQA6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chchd1Q9CQA6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chchd1Q9CQA6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chchd1Q9CQA6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chchd1Q9CQA6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chchd1Q9CQA6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chchd1Q9CQA6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Chchd1Q9CQA6 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.12■□□□□ 0.81
Chchd1Q9CQA6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chchd1Q9CQA6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chchd1Q9CQA6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.07■□□□□ 0.8
Chchd1Q9CQA6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chchd1Q9CQA6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Chchd1Q9CQA6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Chchd1Q9CQA6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chchd1Q9CQA6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chchd1Q9CQA6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chchd1Q9CQA6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chchd1Q9CQA6 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.02■□□□□ 0.8
Chchd1Q9CQA6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chchd1Q9CQA6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
Chchd1Q9CQA6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chchd1Q9CQA6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chchd1Q9CQA6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chchd1Q9CQA6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chchd1Q9CQA6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chchd1Q9CQA6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Chchd1Q9CQA6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chchd1Q9CQA6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chchd1Q9CQA6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chchd1Q9CQA6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chchd1Q9CQA6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Chchd1Q9CQA6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Chchd1Q9CQA6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chchd1Q9CQA6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chchd1Q9CQA6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
Chchd1Q9CQA6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chchd1Q9CQA6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chchd1Q9CQA6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chchd1Q9CQA6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chchd1Q9CQA6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chchd1Q9CQA6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chchd1Q9CQA6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Chchd1Q9CQA6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chchd1Q9CQA6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chchd1Q9CQA6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chchd1Q9CQA6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Chchd1Q9CQA6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chchd1Q9CQA6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chchd1Q9CQA6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chchd1Q9CQA6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chchd1Q9CQA6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Chchd1Q9CQA6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chchd1Q9CQA6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.77■□□□□ 0.75
Chchd1Q9CQA6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chchd1Q9CQA6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chchd1Q9CQA6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chchd1Q9CQA6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Chchd1Q9CQA6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chchd1Q9CQA6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms