Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trim16Q99PP9 Gm25262-201ENSMUST00000174934 133 ntBASIC26.42■■□□□ 1.82
Trim16Q99PP9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Trim16Q99PP9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Trim16Q99PP9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Trim16Q99PP9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Trim16Q99PP9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trim16Q99PP9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trim16Q99PP9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.33■■□□□ 1.81
Trim16Q99PP9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Trim16Q99PP9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.26■■□□□ 1.79
Trim16Q99PP9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim16Q99PP9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim16Q99PP9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Trim16Q99PP9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Trim16Q99PP9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim16Q99PP9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim16Q99PP9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim16Q99PP9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.15■■□□□ 1.78
Trim16Q99PP9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Trim16Q99PP9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
Trim16Q99PP9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.12■■□□□ 1.77
Trim16Q99PP9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Trim16Q99PP9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Trim16Q99PP9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
Trim16Q99PP9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Trim16Q99PP9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trim16Q99PP9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26■■□□□ 1.75
Trim16Q99PP9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.97■■□□□ 1.75
Trim16Q99PP9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim16Q99PP9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.75
Trim16Q99PP9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
Trim16Q99PP9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Trim16Q99PP9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Trim16Q99PP9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
Trim16Q99PP9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Trim16Q99PP9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Trim16Q99PP9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.84■■□□□ 1.73
Trim16Q99PP9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Trim16Q99PP9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.84■■□□□ 1.73
Trim16Q99PP9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Trim16Q99PP9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Trim16Q99PP9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.81■■□□□ 1.72
Trim16Q99PP9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim16Q99PP9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Trim16Q99PP9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Trim16Q99PP9 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.71■■□□□ 1.71
Trim16Q99PP9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.7■■□□□ 1.7
Trim16Q99PP9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.69■■□□□ 1.7
Trim16Q99PP9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trim16Q99PP9 Gm26115-201ENSMUST00000175605 87 ntBASIC25.61■■□□□ 1.69
Trim16Q99PP9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Trim16Q99PP9 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.6■■□□□ 1.69
Trim16Q99PP9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim16Q99PP9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Trim16Q99PP9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim16Q99PP9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim16Q99PP9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Trim16Q99PP9 Gm8109-201ENSMUST00000194076 746 ntBASIC25.54■■□□□ 1.68
Trim16Q99PP9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim16Q99PP9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim16Q99PP9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim16Q99PP9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Trim16Q99PP9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Trim16Q99PP9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Trim16Q99PP9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Trim16Q99PP9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim16Q99PP9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Trim16Q99PP9 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.46■■□□□ 1.67
Trim16Q99PP9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
Trim16Q99PP9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Trim16Q99PP9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.44■■□□□ 1.66
Trim16Q99PP9 Gm27322-201ENSMUST00000184007 104 ntBASIC25.44■■□□□ 1.66
Trim16Q99PP9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
Trim16Q99PP9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trim16Q99PP9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Trim16Q99PP9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.42■■□□□ 1.66
Trim16Q99PP9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.37■■□□□ 1.65
Trim16Q99PP9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Trim16Q99PP9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.34■■□□□ 1.65
Trim16Q99PP9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trim16Q99PP9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.31■■□□□ 1.64
Trim16Q99PP9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Trim16Q99PP9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Trim16Q99PP9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Trim16Q99PP9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Trim16Q99PP9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.25■■□□□ 1.63
Trim16Q99PP9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.24■■□□□ 1.63
Trim16Q99PP9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trim16Q99PP9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Trim16Q99PP9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Trim16Q99PP9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
Trim16Q99PP9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Trim16Q99PP9 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.18■■□□□ 1.62
Trim16Q99PP9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Trim16Q99PP9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Trim16Q99PP9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Trim16Q99PP9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Trim16Q99PP9 Mipep-204ENSMUST00000225043 1548 ntBASIC25.1■■□□□ 1.61
Trim16Q99PP9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms