Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32.79■■■□□ 2.84
Pcdhb22Q91XZ8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Pcdhb22Q91XZ8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
Pcdhb22Q91XZ8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.75■■■□□ 2.83
Pcdhb22Q91XZ8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.75■■■□□ 2.83
Pcdhb22Q91XZ8 Gm25262-201ENSMUST00000174934 133 ntBASIC32.75■■■□□ 2.83
Pcdhb22Q91XZ8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Pcdhb22Q91XZ8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.68■■■□□ 2.82
Pcdhb22Q91XZ8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Pcdhb22Q91XZ8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
Pcdhb22Q91XZ8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Pcdhb22Q91XZ8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Pcdhb22Q91XZ8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.54■■■□□ 2.8
Pcdhb22Q91XZ8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Pcdhb22Q91XZ8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.53■■■□□ 2.8
Pcdhb22Q91XZ8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Pcdhb22Q91XZ8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.49■■■□□ 2.79
Pcdhb22Q91XZ8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.45■■■□□ 2.79
Pcdhb22Q91XZ8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Pcdhb22Q91XZ8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Pcdhb22Q91XZ8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Pcdhb22Q91XZ8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Pcdhb22Q91XZ8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Pcdhb22Q91XZ8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Pcdhb22Q91XZ8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Pcdhb22Q91XZ8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.23■■■□□ 2.75
Pcdhb22Q91XZ8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.21■■■□□ 2.75
Pcdhb22Q91XZ8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Pcdhb22Q91XZ8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.15■■■□□ 2.74
Pcdhb22Q91XZ8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
Pcdhb22Q91XZ8 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.11■■■□□ 2.73
Pcdhb22Q91XZ8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Pcdhb22Q91XZ8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Pcdhb22Q91XZ8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.06■■■□□ 2.72
Pcdhb22Q91XZ8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Pcdhb22Q91XZ8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Pcdhb22Q91XZ8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Pcdhb22Q91XZ8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.01■■■□□ 2.71
Pcdhb22Q91XZ8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Pcdhb22Q91XZ8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Pcdhb22Q91XZ8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Pcdhb22Q91XZ8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.92■■■□□ 2.7
Pcdhb22Q91XZ8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Pcdhb22Q91XZ8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Pcdhb22Q91XZ8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
Pcdhb22Q91XZ8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Pcdhb22Q91XZ8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Pcdhb22Q91XZ8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Pcdhb22Q91XZ8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Pcdhb22Q91XZ8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Pcdhb22Q91XZ8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Pcdhb22Q91XZ8 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.79■■■□□ 2.68
Pcdhb22Q91XZ8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Pcdhb22Q91XZ8 Gm26115-201ENSMUST00000175605 87 ntBASIC31.73■■■□□ 2.67
Pcdhb22Q91XZ8 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.72■■■□□ 2.67
Pcdhb22Q91XZ8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Pcdhb22Q91XZ8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Pcdhb22Q91XZ8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Pcdhb22Q91XZ8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Pcdhb22Q91XZ8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Pcdhb22Q91XZ8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Pcdhb22Q91XZ8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
Pcdhb22Q91XZ8 Gm27322-201ENSMUST00000184007 104 ntBASIC31.62■■■□□ 2.65
Pcdhb22Q91XZ8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
Pcdhb22Q91XZ8 Gm8109-201ENSMUST00000194076 746 ntBASIC31.61■■■□□ 2.65
Pcdhb22Q91XZ8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Pcdhb22Q91XZ8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.6■■■□□ 2.65
Pcdhb22Q91XZ8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.58■■■□□ 2.65
Pcdhb22Q91XZ8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Pcdhb22Q91XZ8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Pcdhb22Q91XZ8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Pcdhb22Q91XZ8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Pcdhb22Q91XZ8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
Pcdhb22Q91XZ8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Pcdhb22Q91XZ8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
Pcdhb22Q91XZ8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.42■■■□□ 2.62
Pcdhb22Q91XZ8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
Pcdhb22Q91XZ8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pcdhb22Q91XZ8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Pcdhb22Q91XZ8 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.34■■■□□ 2.61
Pcdhb22Q91XZ8 Mipep-204ENSMUST00000225043 1548 ntBASIC31.33■■■□□ 2.61
Pcdhb22Q91XZ8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Pcdhb22Q91XZ8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31.29■■■□□ 2.6
Pcdhb22Q91XZ8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Pcdhb22Q91XZ8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
Pcdhb22Q91XZ8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
Pcdhb22Q91XZ8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Pcdhb22Q91XZ8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Pcdhb22Q91XZ8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Pcdhb22Q91XZ8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Pcdhb22Q91XZ8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Pcdhb22Q91XZ8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.09■■■□□ 2.57
Pcdhb22Q91XZ8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Pcdhb22Q91XZ8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Pcdhb22Q91XZ8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Pcdhb22Q91XZ8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.05■■■□□ 2.56
Pcdhb22Q91XZ8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Pcdhb22Q91XZ8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Pcdhb22Q91XZ8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Pcdhb22Q91XZ8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms