Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Zxda-201ENSMUST00000117281 2621 ntBASIC27.19■■□□□ 1.94
Pcdhb3Q91XZ7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Pcdhb3Q91XZ7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Pcdhb3Q91XZ7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Pcdhb3Q91XZ7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
Pcdhb3Q91XZ7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdhb3Q91XZ7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Pcdhb3Q91XZ7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Pcdhb3Q91XZ7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Pcdhb3Q91XZ7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdhb3Q91XZ7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdhb3Q91XZ7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdhb3Q91XZ7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.93■■□□□ 1.9
Pcdhb3Q91XZ7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Pcdhb3Q91XZ7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Pcdhb3Q91XZ7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.88■■□□□ 1.89
Pcdhb3Q91XZ7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.86■■□□□ 1.89
Pcdhb3Q91XZ7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Pcdhb3Q91XZ7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.84■■□□□ 1.89
Pcdhb3Q91XZ7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Pcdhb3Q91XZ7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Pcdhb3Q91XZ7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdhb3Q91XZ7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Pcdhb3Q91XZ7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdhb3Q91XZ7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Pcdhb3Q91XZ7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.71■■□□□ 1.87
Pcdhb3Q91XZ7 Gm27325-201ENSMUST00000175467 74 ntBASIC26.7■■□□□ 1.86
Pcdhb3Q91XZ7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdhb3Q91XZ7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
Pcdhb3Q91XZ7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdhb3Q91XZ7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdhb3Q91XZ7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdhb3Q91XZ7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.6■■□□□ 1.85
Pcdhb3Q91XZ7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Pcdhb3Q91XZ7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhb3Q91XZ7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdhb3Q91XZ7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdhb3Q91XZ7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Pcdhb3Q91XZ7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.53■■□□□ 1.84
Pcdhb3Q91XZ7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.49■■□□□ 1.83
Pcdhb3Q91XZ7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.48■■□□□ 1.83
Pcdhb3Q91XZ7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdhb3Q91XZ7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Pcdhb3Q91XZ7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhb3Q91XZ7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhb3Q91XZ7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhb3Q91XZ7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhb3Q91XZ7 Gm25262-201ENSMUST00000174934 133 ntBASIC26.35■■□□□ 1.81
Pcdhb3Q91XZ7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdhb3Q91XZ7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhb3Q91XZ7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Pcdhb3Q91XZ7 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Pcdhb3Q91XZ7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhb3Q91XZ7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Pcdhb3Q91XZ7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdhb3Q91XZ7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhb3Q91XZ7 Rab21-202ENSMUST00000218831 843 ntBASIC26.22■■□□□ 1.79
Pcdhb3Q91XZ7 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.22■■□□□ 1.79
Pcdhb3Q91XZ7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdhb3Q91XZ7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Pcdhb3Q91XZ7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdhb3Q91XZ7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdhb3Q91XZ7 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.16■■□□□ 1.78
Pcdhb3Q91XZ7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.14■■□□□ 1.78
Pcdhb3Q91XZ7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhb3Q91XZ7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhb3Q91XZ7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Pcdhb3Q91XZ7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Pcdhb3Q91XZ7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdhb3Q91XZ7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdhb3Q91XZ7 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.05■■□□□ 1.76
Pcdhb3Q91XZ7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhb3Q91XZ7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhb3Q91XZ7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Pcdhb3Q91XZ7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26■■□□□ 1.75
Pcdhb3Q91XZ7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Pcdhb3Q91XZ7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Pcdhb3Q91XZ7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Pcdhb3Q91XZ7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Pcdhb3Q91XZ7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.98■■□□□ 1.75
Pcdhb3Q91XZ7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhb3Q91XZ7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.94■■□□□ 1.74
Pcdhb3Q91XZ7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdhb3Q91XZ7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Pcdhb3Q91XZ7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Pcdhb3Q91XZ7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdhb3Q91XZ7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.9■■□□□ 1.74
Pcdhb3Q91XZ7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Pcdhb3Q91XZ7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
Pcdhb3Q91XZ7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Pcdhb3Q91XZ7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
Pcdhb3Q91XZ7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdhb3Q91XZ7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdhb3Q91XZ7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdhb3Q91XZ7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcdhb3Q91XZ7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Pcdhb3Q91XZ7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.83■■□□□ 1.73
Pcdhb3Q91XZ7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdhb3Q91XZ7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.81■■□□□ 1.72
Pcdhb3Q91XZ7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms