Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.97■■□□□ 1.91
Pcdhb8Q91XZ2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.95■■□□□ 1.91
Pcdhb8Q91XZ2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdhb8Q91XZ2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Pcdhb8Q91XZ2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdhb8Q91XZ2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdhb8Q91XZ2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pcdhb8Q91XZ2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.8■■□□□ 1.88
Pcdhb8Q91XZ2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Pcdhb8Q91XZ2 Rab21-202ENSMUST00000218831 843 ntBASIC26.79■■□□□ 1.88
Pcdhb8Q91XZ2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdhb8Q91XZ2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Pcdhb8Q91XZ2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdhb8Q91XZ2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
Pcdhb8Q91XZ2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.62■■□□□ 1.85
Pcdhb8Q91XZ2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdhb8Q91XZ2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdhb8Q91XZ2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhb8Q91XZ2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhb8Q91XZ2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Pcdhb8Q91XZ2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdhb8Q91XZ2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Pcdhb8Q91XZ2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.49■■□□□ 1.83
Pcdhb8Q91XZ2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb8Q91XZ2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.46■■□□□ 1.83
Pcdhb8Q91XZ2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Pcdhb8Q91XZ2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.44■■□□□ 1.82
Pcdhb8Q91XZ2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdhb8Q91XZ2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.41■■□□□ 1.82
Pcdhb8Q91XZ2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
Pcdhb8Q91XZ2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdhb8Q91XZ2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdhb8Q91XZ2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdhb8Q91XZ2 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.36■■□□□ 1.81
Pcdhb8Q91XZ2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
Pcdhb8Q91XZ2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhb8Q91XZ2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdhb8Q91XZ2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdhb8Q91XZ2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdhb8Q91XZ2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdhb8Q91XZ2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Pcdhb8Q91XZ2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Pcdhb8Q91XZ2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pcdhb8Q91XZ2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhb8Q91XZ2 Gm25262-201ENSMUST00000174934 133 ntBASIC26.25■■□□□ 1.79
Pcdhb8Q91XZ2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Pcdhb8Q91XZ2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhb8Q91XZ2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Pcdhb8Q91XZ2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdhb8Q91XZ2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdhb8Q91XZ2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Pcdhb8Q91XZ2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.13■■□□□ 1.77
Pcdhb8Q91XZ2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Pcdhb8Q91XZ2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdhb8Q91XZ2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdhb8Q91XZ2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhb8Q91XZ2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.01■■□□□ 1.75
Pcdhb8Q91XZ2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Pcdhb8Q91XZ2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Pcdhb8Q91XZ2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Pcdhb8Q91XZ2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Pcdhb8Q91XZ2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Pcdhb8Q91XZ2 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.86■■□□□ 1.73
Pcdhb8Q91XZ2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdhb8Q91XZ2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Pcdhb8Q91XZ2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhb8Q91XZ2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdhb8Q91XZ2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdhb8Q91XZ2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.8■■□□□ 1.72
Pcdhb8Q91XZ2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Pcdhb8Q91XZ2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcdhb8Q91XZ2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.76■■□□□ 1.71
Pcdhb8Q91XZ2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb8Q91XZ2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Pcdhb8Q91XZ2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhb8Q91XZ2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhb8Q91XZ2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Pcdhb8Q91XZ2 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.72■■□□□ 1.71
Pcdhb8Q91XZ2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb8Q91XZ2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb8Q91XZ2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Pcdhb8Q91XZ2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdhb8Q91XZ2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhb8Q91XZ2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhb8Q91XZ2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhb8Q91XZ2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhb8Q91XZ2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhb8Q91XZ2 Mipep-204ENSMUST00000225043 1548 ntBASIC25.65■■□□□ 1.7
Pcdhb8Q91XZ2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.65■■□□□ 1.7
Pcdhb8Q91XZ2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.64■■□□□ 1.7
Pcdhb8Q91XZ2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhb8Q91XZ2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.62■■□□□ 1.69
Pcdhb8Q91XZ2 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.62■■□□□ 1.69
Pcdhb8Q91XZ2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.59■■□□□ 1.69
Pcdhb8Q91XZ2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Pcdhb8Q91XZ2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhb8Q91XZ2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
Pcdhb8Q91XZ2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.54■■□□□ 1.68
Pcdhb8Q91XZ2 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.53■■□□□ 1.68
Pcdhb8Q91XZ2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms