Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdhga9Q91XX9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.43■■□□□ 1.98
Pcdhga9Q91XX9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
Pcdhga9Q91XX9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
Pcdhga9Q91XX9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Pcdhga9Q91XX9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.37■■□□□ 1.97
Pcdhga9Q91XX9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pcdhga9Q91XX9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Pcdhga9Q91XX9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Pcdhga9Q91XX9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Pcdhga9Q91XX9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Pcdhga9Q91XX9 Gm26115-201ENSMUST00000175605 87 ntBASIC27.34■■□□□ 1.97
Pcdhga9Q91XX9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pcdhga9Q91XX9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.3■■□□□ 1.96
Pcdhga9Q91XX9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Pcdhga9Q91XX9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pcdhga9Q91XX9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pcdhga9Q91XX9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Pcdhga9Q91XX9 Gm8109-201ENSMUST00000194076 746 ntBASIC27.16■■□□□ 1.94
Pcdhga9Q91XX9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.15■■□□□ 1.94
Pcdhga9Q91XX9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Pcdhga9Q91XX9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.12■■□□□ 1.93
Pcdhga9Q91XX9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Pcdhga9Q91XX9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Pcdhga9Q91XX9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.08■■□□□ 1.93
Pcdhga9Q91XX9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
Pcdhga9Q91XX9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.05■■□□□ 1.92
Pcdhga9Q91XX9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdhga9Q91XX9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdhga9Q91XX9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Pcdhga9Q91XX9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
Pcdhga9Q91XX9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdhga9Q91XX9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Pcdhga9Q91XX9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdhga9Q91XX9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdhga9Q91XX9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Pcdhga9Q91XX9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdhga9Q91XX9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Pcdhga9Q91XX9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Pcdhga9Q91XX9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.84■■□□□ 1.89
Pcdhga9Q91XX9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Pcdhga9Q91XX9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pcdhga9Q91XX9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Pcdhga9Q91XX9 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.79■■□□□ 1.88
Pcdhga9Q91XX9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdhga9Q91XX9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdhga9Q91XX9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Pcdhga9Q91XX9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Pcdhga9Q91XX9 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.72■■□□□ 1.87
Pcdhga9Q91XX9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcdhga9Q91XX9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.61■■□□□ 1.85
Pcdhga9Q91XX9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdhga9Q91XX9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdhga9Q91XX9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdhga9Q91XX9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
Pcdhga9Q91XX9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Pcdhga9Q91XX9 Gm27322-201ENSMUST00000184007 104 ntBASIC26.54■■□□□ 1.84
Pcdhga9Q91XX9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhga9Q91XX9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhga9Q91XX9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhga9Q91XX9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhga9Q91XX9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhga9Q91XX9 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Pcdhga9Q91XX9 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.46■■□□□ 1.83
Pcdhga9Q91XX9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdhga9Q91XX9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdhga9Q91XX9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdhga9Q91XX9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhga9Q91XX9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhga9Q91XX9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.35■■□□□ 1.81
Pcdhga9Q91XX9 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.34■■□□□ 1.81
Pcdhga9Q91XX9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdhga9Q91XX9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.33■■□□□ 1.8
Pcdhga9Q91XX9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdhga9Q91XX9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdhga9Q91XX9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Pcdhga9Q91XX9 Gm24804-201ENSMUST00000174982 85 ntBASIC26.28■■□□□ 1.8
Pcdhga9Q91XX9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhga9Q91XX9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Pcdhga9Q91XX9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdhga9Q91XX9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdhga9Q91XX9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Pcdhga9Q91XX9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.19■■□□□ 1.78
Pcdhga9Q91XX9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Pcdhga9Q91XX9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdhga9Q91XX9 Mipep-204ENSMUST00000225043 1548 ntBASIC26.15■■□□□ 1.78
Pcdhga9Q91XX9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.14■■□□□ 1.78
Pcdhga9Q91XX9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Pcdhga9Q91XX9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Pcdhga9Q91XX9 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.13■■□□□ 1.77
Pcdhga9Q91XX9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdhga9Q91XX9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
Pcdhga9Q91XX9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdhga9Q91XX9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdhga9Q91XX9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Pcdhga9Q91XX9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26■■□□□ 1.75
Pcdhga9Q91XX9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Pcdhga9Q91XX9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.96■■□□□ 1.75
Pcdhga9Q91XX9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhga9Q91XX9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms