Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Rab40bQ8VHP8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Rab40bQ8VHP8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rab40bQ8VHP8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rab40bQ8VHP8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.6■■□□□ 1.53
Rab40bQ8VHP8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rab40bQ8VHP8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
Rab40bQ8VHP8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rab40bQ8VHP8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rab40bQ8VHP8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rab40bQ8VHP8 Gm27325-201ENSMUST00000175467 74 ntBASIC24.49■■□□□ 1.51
Rab40bQ8VHP8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Rab40bQ8VHP8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rab40bQ8VHP8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Rab40bQ8VHP8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.43■■□□□ 1.5
Rab40bQ8VHP8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.42■■□□□ 1.5
Rab40bQ8VHP8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Rab40bQ8VHP8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rab40bQ8VHP8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rab40bQ8VHP8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.29■■□□□ 1.48
Rab40bQ8VHP8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rab40bQ8VHP8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rab40bQ8VHP8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rab40bQ8VHP8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rab40bQ8VHP8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Rab40bQ8VHP8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rab40bQ8VHP8 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.17■■□□□ 1.46
Rab40bQ8VHP8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rab40bQ8VHP8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rab40bQ8VHP8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.16■■□□□ 1.46
Rab40bQ8VHP8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rab40bQ8VHP8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rab40bQ8VHP8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.08■■□□□ 1.45
Rab40bQ8VHP8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rab40bQ8VHP8 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.06■■□□□ 1.44
Rab40bQ8VHP8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rab40bQ8VHP8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.06■■□□□ 1.44
Rab40bQ8VHP8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rab40bQ8VHP8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rab40bQ8VHP8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rab40bQ8VHP8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Rab40bQ8VHP8 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rab40bQ8VHP8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
Rab40bQ8VHP8 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.99■■□□□ 1.43
Rab40bQ8VHP8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.99■■□□□ 1.43
Rab40bQ8VHP8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Rab40bQ8VHP8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Rab40bQ8VHP8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
Rab40bQ8VHP8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.92■■□□□ 1.42
Rab40bQ8VHP8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Rab40bQ8VHP8 Gm25238-201ENSMUST00000174914 89 ntBASIC23.89■■□□□ 1.41
Rab40bQ8VHP8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Rab40bQ8VHP8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
Rab40bQ8VHP8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Rab40bQ8VHP8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Rab40bQ8VHP8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Rab40bQ8VHP8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Rab40bQ8VHP8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rab40bQ8VHP8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rab40bQ8VHP8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rab40bQ8VHP8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rab40bQ8VHP8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.81■■□□□ 1.4
Rab40bQ8VHP8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rab40bQ8VHP8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rab40bQ8VHP8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rab40bQ8VHP8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.78■■□□□ 1.4
Rab40bQ8VHP8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rab40bQ8VHP8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rab40bQ8VHP8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.74■■□□□ 1.39
Rab40bQ8VHP8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.72■■□□□ 1.39
Rab40bQ8VHP8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rab40bQ8VHP8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rab40bQ8VHP8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rab40bQ8VHP8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rab40bQ8VHP8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Rab40bQ8VHP8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.61■■□□□ 1.37
Rab40bQ8VHP8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.6■■□□□ 1.37
Rab40bQ8VHP8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rab40bQ8VHP8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rab40bQ8VHP8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rab40bQ8VHP8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rab40bQ8VHP8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rab40bQ8VHP8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rab40bQ8VHP8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
Rab40bQ8VHP8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rab40bQ8VHP8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rab40bQ8VHP8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rab40bQ8VHP8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rab40bQ8VHP8 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.5■■□□□ 1.35
Rab40bQ8VHP8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.5■■□□□ 1.35
Rab40bQ8VHP8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rab40bQ8VHP8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Rab40bQ8VHP8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rab40bQ8VHP8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rab40bQ8VHP8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.45■■□□□ 1.34
Rab40bQ8VHP8 Rab21-202ENSMUST00000218831 843 ntBASIC23.44■■□□□ 1.34
Rab40bQ8VHP8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rab40bQ8VHP8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
Rab40bQ8VHP8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rab40bQ8VHP8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms