Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Cacnb1Q8R3Z5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Cacnb1Q8R3Z5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Cacnb1Q8R3Z5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.77■■■□□ 2.52
Cacnb1Q8R3Z5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Cacnb1Q8R3Z5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
Cacnb1Q8R3Z5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Cacnb1Q8R3Z5 Gm25262-201ENSMUST00000174934 133 ntBASIC30.74■■■□□ 2.51
Cacnb1Q8R3Z5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Cacnb1Q8R3Z5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Cacnb1Q8R3Z5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Cacnb1Q8R3Z5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Cacnb1Q8R3Z5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Cacnb1Q8R3Z5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Cacnb1Q8R3Z5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.56■■■□□ 2.48
Cacnb1Q8R3Z5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Cacnb1Q8R3Z5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.49■■■□□ 2.47
Cacnb1Q8R3Z5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Cacnb1Q8R3Z5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Cacnb1Q8R3Z5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Cacnb1Q8R3Z5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
Cacnb1Q8R3Z5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Cacnb1Q8R3Z5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Cacnb1Q8R3Z5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Cacnb1Q8R3Z5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Cacnb1Q8R3Z5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.3■■■□□ 2.44
Cacnb1Q8R3Z5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Cacnb1Q8R3Z5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Cacnb1Q8R3Z5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Cacnb1Q8R3Z5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Cacnb1Q8R3Z5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Cacnb1Q8R3Z5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Cacnb1Q8R3Z5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Cacnb1Q8R3Z5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Cacnb1Q8R3Z5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.15■■■□□ 2.42
Cacnb1Q8R3Z5 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.13■■■□□ 2.41
Cacnb1Q8R3Z5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.12■■■□□ 2.41
Cacnb1Q8R3Z5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.09■■■□□ 2.41
Cacnb1Q8R3Z5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.04■■■□□ 2.4
Cacnb1Q8R3Z5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.04■■■□□ 2.4
Cacnb1Q8R3Z5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Cacnb1Q8R3Z5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Cacnb1Q8R3Z5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Cacnb1Q8R3Z5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Cacnb1Q8R3Z5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Cacnb1Q8R3Z5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Cacnb1Q8R3Z5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Cacnb1Q8R3Z5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Cacnb1Q8R3Z5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Cacnb1Q8R3Z5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Cacnb1Q8R3Z5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Cacnb1Q8R3Z5 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.82■■■□□ 2.36
Cacnb1Q8R3Z5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Cacnb1Q8R3Z5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Cacnb1Q8R3Z5 Gm26115-201ENSMUST00000175605 87 ntBASIC29.79■■■□□ 2.36
Cacnb1Q8R3Z5 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.78■■■□□ 2.36
Cacnb1Q8R3Z5 Gm8109-201ENSMUST00000194076 746 ntBASIC29.77■■■□□ 2.36
Cacnb1Q8R3Z5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
Cacnb1Q8R3Z5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Cacnb1Q8R3Z5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Cacnb1Q8R3Z5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
Cacnb1Q8R3Z5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Cacnb1Q8R3Z5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.7■■■□□ 2.34
Cacnb1Q8R3Z5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Cacnb1Q8R3Z5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Cacnb1Q8R3Z5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Cacnb1Q8R3Z5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Cacnb1Q8R3Z5 Gm27322-201ENSMUST00000184007 104 ntBASIC29.66■■■□□ 2.34
Cacnb1Q8R3Z5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.65■■■□□ 2.34
Cacnb1Q8R3Z5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Cacnb1Q8R3Z5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.6■■■□□ 2.33
Cacnb1Q8R3Z5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.58■■■□□ 2.33
Cacnb1Q8R3Z5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.57■■■□□ 2.32
Cacnb1Q8R3Z5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
Cacnb1Q8R3Z5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
Cacnb1Q8R3Z5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Cacnb1Q8R3Z5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Cacnb1Q8R3Z5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Cacnb1Q8R3Z5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.44■■■□□ 2.3
Cacnb1Q8R3Z5 Mipep-204ENSMUST00000225043 1548 ntBASIC29.4■■■□□ 2.3
Cacnb1Q8R3Z5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Cacnb1Q8R3Z5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Cacnb1Q8R3Z5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Cacnb1Q8R3Z5 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.35■■■□□ 2.29
Cacnb1Q8R3Z5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Cacnb1Q8R3Z5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
Cacnb1Q8R3Z5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Cacnb1Q8R3Z5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Cacnb1Q8R3Z5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Cacnb1Q8R3Z5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
Cacnb1Q8R3Z5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Cacnb1Q8R3Z5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Cacnb1Q8R3Z5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Cacnb1Q8R3Z5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Cacnb1Q8R3Z5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Cacnb1Q8R3Z5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29.18■■■□□ 2.26
Cacnb1Q8R3Z5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Cacnb1Q8R3Z5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.15■■■□□ 2.26
Cacnb1Q8R3Z5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29.13■■■□□ 2.25
Cacnb1Q8R3Z5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29.13■■■□□ 2.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms