Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Nudcd3Q8R1N4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Nudcd3Q8R1N4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
Nudcd3Q8R1N4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.2■■□□□ 1.94
Nudcd3Q8R1N4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Nudcd3Q8R1N4 Gm27325-201ENSMUST00000175467 74 ntBASIC27.16■■□□□ 1.94
Nudcd3Q8R1N4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Nudcd3Q8R1N4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
Nudcd3Q8R1N4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Nudcd3Q8R1N4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
Nudcd3Q8R1N4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Nudcd3Q8R1N4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Nudcd3Q8R1N4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Nudcd3Q8R1N4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Nudcd3Q8R1N4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.95■■□□□ 1.91
Nudcd3Q8R1N4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Nudcd3Q8R1N4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Nudcd3Q8R1N4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Nudcd3Q8R1N4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Nudcd3Q8R1N4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.9■■□□□ 1.9
Nudcd3Q8R1N4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.88■■□□□ 1.89
Nudcd3Q8R1N4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Nudcd3Q8R1N4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
Nudcd3Q8R1N4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Nudcd3Q8R1N4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.78■■□□□ 1.88
Nudcd3Q8R1N4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Nudcd3Q8R1N4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Nudcd3Q8R1N4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Nudcd3Q8R1N4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.71■■□□□ 1.87
Nudcd3Q8R1N4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Nudcd3Q8R1N4 Gm25238-201ENSMUST00000174914 89 ntBASIC26.66■■□□□ 1.86
Nudcd3Q8R1N4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.66■■□□□ 1.86
Nudcd3Q8R1N4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Nudcd3Q8R1N4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
Nudcd3Q8R1N4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Nudcd3Q8R1N4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Nudcd3Q8R1N4 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.61■■□□□ 1.85
Nudcd3Q8R1N4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Nudcd3Q8R1N4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Nudcd3Q8R1N4 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.58■■□□□ 1.85
Nudcd3Q8R1N4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Nudcd3Q8R1N4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.53■■□□□ 1.84
Nudcd3Q8R1N4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Nudcd3Q8R1N4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.51■■□□□ 1.83
Nudcd3Q8R1N4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.5■■□□□ 1.83
Nudcd3Q8R1N4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Nudcd3Q8R1N4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Nudcd3Q8R1N4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Nudcd3Q8R1N4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Nudcd3Q8R1N4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Nudcd3Q8R1N4 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.4■■□□□ 1.82
Nudcd3Q8R1N4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.4■■□□□ 1.82
Nudcd3Q8R1N4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nudcd3Q8R1N4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nudcd3Q8R1N4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Nudcd3Q8R1N4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nudcd3Q8R1N4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Nudcd3Q8R1N4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nudcd3Q8R1N4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Nudcd3Q8R1N4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nudcd3Q8R1N4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.27■■□□□ 1.8
Nudcd3Q8R1N4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Nudcd3Q8R1N4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Nudcd3Q8R1N4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.24■■□□□ 1.79
Nudcd3Q8R1N4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Nudcd3Q8R1N4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
Nudcd3Q8R1N4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Nudcd3Q8R1N4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Nudcd3Q8R1N4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
Nudcd3Q8R1N4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Nudcd3Q8R1N4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.18■■□□□ 1.78
Nudcd3Q8R1N4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Nudcd3Q8R1N4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Nudcd3Q8R1N4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.09■■□□□ 1.77
Nudcd3Q8R1N4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Nudcd3Q8R1N4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Nudcd3Q8R1N4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
Nudcd3Q8R1N4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.06■■□□□ 1.76
Nudcd3Q8R1N4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nudcd3Q8R1N4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nudcd3Q8R1N4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Nudcd3Q8R1N4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Nudcd3Q8R1N4 Rab21-202ENSMUST00000218831 843 ntBASIC26.03■■□□□ 1.76
Nudcd3Q8R1N4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.02■■□□□ 1.76
Nudcd3Q8R1N4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.02■■□□□ 1.76
Nudcd3Q8R1N4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Nudcd3Q8R1N4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Nudcd3Q8R1N4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Nudcd3Q8R1N4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Nudcd3Q8R1N4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Nudcd3Q8R1N4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
Nudcd3Q8R1N4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Nudcd3Q8R1N4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Nudcd3Q8R1N4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
Nudcd3Q8R1N4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
Nudcd3Q8R1N4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Nudcd3Q8R1N4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Nudcd3Q8R1N4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Nudcd3Q8R1N4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Nudcd3Q8R1N4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms