Protein–RNA interactions for Protein: Q8R043

Smim29, Uncharacterized protein SMIM29, mousemouse

Predictions only

Length 75 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim29Q8R043 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Smim29Q8R043 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim29Q8R043 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Smim29Q8R043 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17.41■□□□□ 0.38
Smim29Q8R043 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC17.41■□□□□ 0.38
Smim29Q8R043 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim29Q8R043 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim29Q8R043 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smim29Q8R043 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim29Q8R043 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smim29Q8R043 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.32■□□□□ 0.36
Smim29Q8R043 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim29Q8R043 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim29Q8R043 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Smim29Q8R043 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smim29Q8R043 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim29Q8R043 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smim29Q8R043 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC17.22■□□□□ 0.35
Smim29Q8R043 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC17.22■□□□□ 0.35
Smim29Q8R043 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim29Q8R043 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim29Q8R043 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim29Q8R043 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim29Q8R043 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.17■□□□□ 0.34
Smim29Q8R043 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smim29Q8R043 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim29Q8R043 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Smim29Q8R043 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim29Q8R043 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC17.13■□□□□ 0.33
Smim29Q8R043 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim29Q8R043 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smim29Q8R043 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.07■□□□□ 0.32
Smim29Q8R043 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.06■□□□□ 0.32
Smim29Q8R043 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Smim29Q8R043 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smim29Q8R043 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smim29Q8R043 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC17■□□□□ 0.31
Smim29Q8R043 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smim29Q8R043 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smim29Q8R043 Rab21-202ENSMUST00000218831 843 ntBASIC16.98■□□□□ 0.31
Smim29Q8R043 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smim29Q8R043 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Smim29Q8R043 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smim29Q8R043 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smim29Q8R043 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smim29Q8R043 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smim29Q8R043 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC16.93■□□□□ 0.3
Smim29Q8R043 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smim29Q8R043 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smim29Q8R043 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Smim29Q8R043 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smim29Q8R043 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC16.9■□□□□ 0.3
Smim29Q8R043 Gm2415-204ENSMUST00000190235 2004 ntBASIC16.89■□□□□ 0.29
Smim29Q8R043 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smim29Q8R043 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smim29Q8R043 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smim29Q8R043 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smim29Q8R043 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smim29Q8R043 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC16.86■□□□□ 0.29
Smim29Q8R043 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC16.86■□□□□ 0.29
Smim29Q8R043 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smim29Q8R043 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC16.85■□□□□ 0.29
Smim29Q8R043 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smim29Q8R043 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Smim29Q8R043 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC16.84■□□□□ 0.29
Smim29Q8R043 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smim29Q8R043 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smim29Q8R043 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smim29Q8R043 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smim29Q8R043 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smim29Q8R043 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smim29Q8R043 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Smim29Q8R043 AC153504.1-201ENSMUST00000218379 2290 ntBASIC16.77■□□□□ 0.27
Smim29Q8R043 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smim29Q8R043 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim29Q8R043 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim29Q8R043 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim29Q8R043 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Smim29Q8R043 Gm6658-202ENSMUST00000209493 1885 ntBASIC16.75■□□□□ 0.27
Smim29Q8R043 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim29Q8R043 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim29Q8R043 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Smim29Q8R043 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC16.72■□□□□ 0.27
Smim29Q8R043 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smim29Q8R043 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smim29Q8R043 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smim29Q8R043 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smim29Q8R043 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim29Q8R043 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smim29Q8R043 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim29Q8R043 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim29Q8R043 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim29Q8R043 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim29Q8R043 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim29Q8R043 AL845457.1-201ENSMUST00000197244 68 ntBASIC16.58■□□□□ 0.24
Smim29Q8R043 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smim29Q8R043 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smim29Q8R043 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Smim29Q8R043 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smim29Q8R043 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms