Protein–RNA interactions for Protein: Q8R043

Smim29, Uncharacterized protein SMIM29, mousemouse

Predictions only

Length 75 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim29Q8R043 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Smim29Q8R043 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smim29Q8R043 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Smim29Q8R043 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17.41■□□□□ 0.38
Smim29Q8R043 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC17.41■□□□□ 0.38
Smim29Q8R043 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smim29Q8R043 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smim29Q8R043 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smim29Q8R043 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim29Q8R043 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smim29Q8R043 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC17.32■□□□□ 0.36
Smim29Q8R043 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim29Q8R043 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim29Q8R043 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Smim29Q8R043 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smim29Q8R043 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smim29Q8R043 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smim29Q8R043 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC17.22■□□□□ 0.35
Smim29Q8R043 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC17.22■□□□□ 0.35
Smim29Q8R043 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smim29Q8R043 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smim29Q8R043 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smim29Q8R043 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smim29Q8R043 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.17■□□□□ 0.34
Smim29Q8R043 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smim29Q8R043 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smim29Q8R043 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Smim29Q8R043 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smim29Q8R043 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC17.13■□□□□ 0.33
Smim29Q8R043 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smim29Q8R043 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Smim29Q8R043 Zfp131-207ENSMUST00000224946 1783 ntBASIC17.07■□□□□ 0.32
Smim29Q8R043 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.06■□□□□ 0.32
Smim29Q8R043 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Smim29Q8R043 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Smim29Q8R043 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Smim29Q8R043 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC17■□□□□ 0.31
Smim29Q8R043 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smim29Q8R043 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smim29Q8R043 Rab21-202ENSMUST00000218831 843 ntBASIC16.98■□□□□ 0.31
Smim29Q8R043 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Smim29Q8R043 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Smim29Q8R043 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Smim29Q8R043 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Smim29Q8R043 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smim29Q8R043 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Smim29Q8R043 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC16.93■□□□□ 0.3
Smim29Q8R043 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smim29Q8R043 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Smim29Q8R043 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Smim29Q8R043 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smim29Q8R043 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC16.9■□□□□ 0.3
Smim29Q8R043 Gm2415-204ENSMUST00000190235 2004 ntBASIC16.89■□□□□ 0.29
Smim29Q8R043 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smim29Q8R043 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smim29Q8R043 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smim29Q8R043 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smim29Q8R043 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smim29Q8R043 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC16.86■□□□□ 0.29
Smim29Q8R043 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC16.86■□□□□ 0.29
Smim29Q8R043 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smim29Q8R043 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC16.85■□□□□ 0.29
Smim29Q8R043 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smim29Q8R043 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Smim29Q8R043 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC16.84■□□□□ 0.29
Smim29Q8R043 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smim29Q8R043 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smim29Q8R043 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smim29Q8R043 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smim29Q8R043 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Smim29Q8R043 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Smim29Q8R043 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Smim29Q8R043 AC153504.1-201ENSMUST00000218379 2290 ntBASIC16.77■□□□□ 0.27
Smim29Q8R043 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smim29Q8R043 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim29Q8R043 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim29Q8R043 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim29Q8R043 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Smim29Q8R043 Gm6658-202ENSMUST00000209493 1885 ntBASIC16.75■□□□□ 0.27
Smim29Q8R043 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim29Q8R043 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim29Q8R043 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Smim29Q8R043 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC16.72■□□□□ 0.27
Smim29Q8R043 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smim29Q8R043 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smim29Q8R043 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smim29Q8R043 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smim29Q8R043 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim29Q8R043 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smim29Q8R043 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim29Q8R043 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim29Q8R043 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim29Q8R043 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim29Q8R043 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim29Q8R043 AL845457.1-201ENSMUST00000197244 68 ntBASIC16.58■□□□□ 0.24
Smim29Q8R043 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smim29Q8R043 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smim29Q8R043 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Smim29Q8R043 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smim29Q8R043 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms