Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Slc46a2Q8CA03 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Slc46a2Q8CA03 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Slc46a2Q8CA03 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Slc46a2Q8CA03 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Slc46a2Q8CA03 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
Slc46a2Q8CA03 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Slc46a2Q8CA03 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.33■■□□□ 1.81
Slc46a2Q8CA03 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Slc46a2Q8CA03 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Slc46a2Q8CA03 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.22■■□□□ 1.79
Slc46a2Q8CA03 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Slc46a2Q8CA03 Gm27325-201ENSMUST00000175467 74 ntBASIC26.19■■□□□ 1.78
Slc46a2Q8CA03 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Slc46a2Q8CA03 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Slc46a2Q8CA03 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.17■■□□□ 1.78
Slc46a2Q8CA03 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Slc46a2Q8CA03 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Slc46a2Q8CA03 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.09■■□□□ 1.77
Slc46a2Q8CA03 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Slc46a2Q8CA03 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Slc46a2Q8CA03 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Slc46a2Q8CA03 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Slc46a2Q8CA03 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.98■■□□□ 1.75
Slc46a2Q8CA03 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.97■■□□□ 1.75
Slc46a2Q8CA03 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.9■■□□□ 1.74
Slc46a2Q8CA03 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Slc46a2Q8CA03 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Slc46a2Q8CA03 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Slc46a2Q8CA03 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Slc46a2Q8CA03 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
Slc46a2Q8CA03 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.84■■□□□ 1.73
Slc46a2Q8CA03 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.83■■□□□ 1.73
Slc46a2Q8CA03 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Slc46a2Q8CA03 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Slc46a2Q8CA03 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Slc46a2Q8CA03 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Slc46a2Q8CA03 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.77■■□□□ 1.72
Slc46a2Q8CA03 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Slc46a2Q8CA03 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Slc46a2Q8CA03 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Slc46a2Q8CA03 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Slc46a2Q8CA03 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Slc46a2Q8CA03 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.7■■□□□ 1.71
Slc46a2Q8CA03 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Slc46a2Q8CA03 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Slc46a2Q8CA03 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.69
Slc46a2Q8CA03 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Slc46a2Q8CA03 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.62■■□□□ 1.69
Slc46a2Q8CA03 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Slc46a2Q8CA03 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Slc46a2Q8CA03 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Slc46a2Q8CA03 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Slc46a2Q8CA03 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.59■■□□□ 1.69
Slc46a2Q8CA03 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Slc46a2Q8CA03 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.58■■□□□ 1.69
Slc46a2Q8CA03 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Slc46a2Q8CA03 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Slc46a2Q8CA03 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Slc46a2Q8CA03 Gm25238-201ENSMUST00000174914 89 ntBASIC25.54■■□□□ 1.68
Slc46a2Q8CA03 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Slc46a2Q8CA03 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Slc46a2Q8CA03 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Slc46a2Q8CA03 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Slc46a2Q8CA03 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
Slc46a2Q8CA03 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.48■■□□□ 1.67
Slc46a2Q8CA03 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Slc46a2Q8CA03 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Slc46a2Q8CA03 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.44■■□□□ 1.66
Slc46a2Q8CA03 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Slc46a2Q8CA03 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Slc46a2Q8CA03 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.41■■□□□ 1.66
Slc46a2Q8CA03 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Slc46a2Q8CA03 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Slc46a2Q8CA03 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Slc46a2Q8CA03 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Slc46a2Q8CA03 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Slc46a2Q8CA03 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Slc46a2Q8CA03 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Slc46a2Q8CA03 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Slc46a2Q8CA03 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Slc46a2Q8CA03 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Slc46a2Q8CA03 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Slc46a2Q8CA03 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
Slc46a2Q8CA03 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.22■■□□□ 1.63
Slc46a2Q8CA03 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Slc46a2Q8CA03 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Slc46a2Q8CA03 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.18■■□□□ 1.62
Slc46a2Q8CA03 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Slc46a2Q8CA03 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.14■■□□□ 1.62
Slc46a2Q8CA03 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Slc46a2Q8CA03 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
Slc46a2Q8CA03 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
Slc46a2Q8CA03 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.11■■□□□ 1.61
Slc46a2Q8CA03 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Slc46a2Q8CA03 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Slc46a2Q8CA03 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Slc46a2Q8CA03 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Slc46a2Q8CA03 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Slc46a2Q8CA03 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.08■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms