Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Lsm11Q8BUV6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Lsm11Q8BUV6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Lsm11Q8BUV6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Lsm11Q8BUV6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.26■■□□□ 1.31
Lsm11Q8BUV6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Lsm11Q8BUV6 Gm27325-201ENSMUST00000175467 74 ntBASIC23.17■■□□□ 1.3
Lsm11Q8BUV6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Lsm11Q8BUV6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Lsm11Q8BUV6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.15■■□□□ 1.3
Lsm11Q8BUV6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Lsm11Q8BUV6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lsm11Q8BUV6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Lsm11Q8BUV6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Lsm11Q8BUV6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.04■■□□□ 1.28
Lsm11Q8BUV6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.01■■□□□ 1.27
Lsm11Q8BUV6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23■■□□□ 1.27
Lsm11Q8BUV6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Lsm11Q8BUV6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Lsm11Q8BUV6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Lsm11Q8BUV6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Lsm11Q8BUV6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Lsm11Q8BUV6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Lsm11Q8BUV6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Lsm11Q8BUV6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Lsm11Q8BUV6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Lsm11Q8BUV6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Lsm11Q8BUV6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Lsm11Q8BUV6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.84■■□□□ 1.25
Lsm11Q8BUV6 Gm25238-201ENSMUST00000174914 89 ntBASIC22.8■■□□□ 1.24
Lsm11Q8BUV6 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.78■■□□□ 1.24
Lsm11Q8BUV6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Lsm11Q8BUV6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Lsm11Q8BUV6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Lsm11Q8BUV6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.74■■□□□ 1.23
Lsm11Q8BUV6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Lsm11Q8BUV6 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.73■■□□□ 1.23
Lsm11Q8BUV6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.73■■□□□ 1.23
Lsm11Q8BUV6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Lsm11Q8BUV6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Lsm11Q8BUV6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Lsm11Q8BUV6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Lsm11Q8BUV6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Lsm11Q8BUV6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Lsm11Q8BUV6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.65■■□□□ 1.22
Lsm11Q8BUV6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Lsm11Q8BUV6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Lsm11Q8BUV6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Lsm11Q8BUV6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Lsm11Q8BUV6 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.58■■□□□ 1.21
Lsm11Q8BUV6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Lsm11Q8BUV6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.58■■□□□ 1.21
Lsm11Q8BUV6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Lsm11Q8BUV6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lsm11Q8BUV6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Lsm11Q8BUV6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Lsm11Q8BUV6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Lsm11Q8BUV6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lsm11Q8BUV6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lsm11Q8BUV6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
Lsm11Q8BUV6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lsm11Q8BUV6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
Lsm11Q8BUV6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Lsm11Q8BUV6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Lsm11Q8BUV6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Lsm11Q8BUV6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.42■■□□□ 1.18
Lsm11Q8BUV6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lsm11Q8BUV6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.39■■□□□ 1.17
Lsm11Q8BUV6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.37■■□□□ 1.17
Lsm11Q8BUV6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lsm11Q8BUV6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lsm11Q8BUV6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lsm11Q8BUV6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lsm11Q8BUV6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lsm11Q8BUV6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.34■■□□□ 1.17
Lsm11Q8BUV6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lsm11Q8BUV6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
Lsm11Q8BUV6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
Lsm11Q8BUV6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Lsm11Q8BUV6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lsm11Q8BUV6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lsm11Q8BUV6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lsm11Q8BUV6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.27■■□□□ 1.16
Lsm11Q8BUV6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Lsm11Q8BUV6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.26■■□□□ 1.15
Lsm11Q8BUV6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Lsm11Q8BUV6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lsm11Q8BUV6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lsm11Q8BUV6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lsm11Q8BUV6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Lsm11Q8BUV6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lsm11Q8BUV6 Rab21-202ENSMUST00000218831 843 ntBASIC22.2■■□□□ 1.14
Lsm11Q8BUV6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lsm11Q8BUV6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Lsm11Q8BUV6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
Lsm11Q8BUV6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Lsm11Q8BUV6 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.15■■□□□ 1.14
Lsm11Q8BUV6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.15■■□□□ 1.14
Lsm11Q8BUV6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lsm11Q8BUV6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms