Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Ppp1r3eQ8BRJ4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Ppp1r3eQ8BRJ4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.96■■□□□ 1.75
Ppp1r3eQ8BRJ4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
Ppp1r3eQ8BRJ4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ppp1r3eQ8BRJ4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ppp1r3eQ8BRJ4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ppp1r3eQ8BRJ4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.8■■□□□ 1.72
Ppp1r3eQ8BRJ4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ppp1r3eQ8BRJ4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ppp1r3eQ8BRJ4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ppp1r3eQ8BRJ4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Ppp1r3eQ8BRJ4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ppp1r3eQ8BRJ4 Gm27325-201ENSMUST00000175467 74 ntBASIC25.71■■□□□ 1.71
Ppp1r3eQ8BRJ4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ppp1r3eQ8BRJ4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ppp1r3eQ8BRJ4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.62■■□□□ 1.69
Ppp1r3eQ8BRJ4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Ppp1r3eQ8BRJ4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ppp1r3eQ8BRJ4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.61■■□□□ 1.69
Ppp1r3eQ8BRJ4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ppp1r3eQ8BRJ4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.6■■□□□ 1.69
Ppp1r3eQ8BRJ4 Gm25238-201ENSMUST00000174914 89 ntBASIC25.6■■□□□ 1.69
Ppp1r3eQ8BRJ4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ppp1r3eQ8BRJ4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
Ppp1r3eQ8BRJ4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ppp1r3eQ8BRJ4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.47■■□□□ 1.67
Ppp1r3eQ8BRJ4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ppp1r3eQ8BRJ4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ppp1r3eQ8BRJ4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Ppp1r3eQ8BRJ4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ppp1r3eQ8BRJ4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ppp1r3eQ8BRJ4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ppp1r3eQ8BRJ4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ppp1r3eQ8BRJ4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.36■■□□□ 1.65
Ppp1r3eQ8BRJ4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ppp1r3eQ8BRJ4 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.31■■□□□ 1.64
Ppp1r3eQ8BRJ4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ppp1r3eQ8BRJ4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ppp1r3eQ8BRJ4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ppp1r3eQ8BRJ4 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.25■■□□□ 1.63
Ppp1r3eQ8BRJ4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ppp1r3eQ8BRJ4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ppp1r3eQ8BRJ4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.2■■□□□ 1.63
Ppp1r3eQ8BRJ4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ppp1r3eQ8BRJ4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.18■■□□□ 1.62
Ppp1r3eQ8BRJ4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ppp1r3eQ8BRJ4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Ppp1r3eQ8BRJ4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ppp1r3eQ8BRJ4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.14■■□□□ 1.62
Ppp1r3eQ8BRJ4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ppp1r3eQ8BRJ4 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.1■■□□□ 1.61
Ppp1r3eQ8BRJ4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ppp1r3eQ8BRJ4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Ppp1r3eQ8BRJ4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Ppp1r3eQ8BRJ4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Ppp1r3eQ8BRJ4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ppp1r3eQ8BRJ4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Ppp1r3eQ8BRJ4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ppp1r3eQ8BRJ4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ppp1r3eQ8BRJ4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25■■□□□ 1.59
Ppp1r3eQ8BRJ4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
Ppp1r3eQ8BRJ4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
Ppp1r3eQ8BRJ4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ppp1r3eQ8BRJ4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ppp1r3eQ8BRJ4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ppp1r3eQ8BRJ4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ppp1r3eQ8BRJ4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.9■■□□□ 1.58
Ppp1r3eQ8BRJ4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.89■■□□□ 1.58
Ppp1r3eQ8BRJ4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.87■■□□□ 1.57
Ppp1r3eQ8BRJ4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ppp1r3eQ8BRJ4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ppp1r3eQ8BRJ4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ppp1r3eQ8BRJ4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Ppp1r3eQ8BRJ4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Ppp1r3eQ8BRJ4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
Ppp1r3eQ8BRJ4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Ppp1r3eQ8BRJ4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Ppp1r3eQ8BRJ4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ppp1r3eQ8BRJ4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ppp1r3eQ8BRJ4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.74■■□□□ 1.55
Ppp1r3eQ8BRJ4 Gm25262-201ENSMUST00000174934 133 ntBASIC24.74■■□□□ 1.55
Ppp1r3eQ8BRJ4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ppp1r3eQ8BRJ4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Ppp1r3eQ8BRJ4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Ppp1r3eQ8BRJ4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ppp1r3eQ8BRJ4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ppp1r3eQ8BRJ4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ppp1r3eQ8BRJ4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ppp1r3eQ8BRJ4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.66■■□□□ 1.54
Ppp1r3eQ8BRJ4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
Ppp1r3eQ8BRJ4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Ppp1r3eQ8BRJ4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ppp1r3eQ8BRJ4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.63■■□□□ 1.53
Ppp1r3eQ8BRJ4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ppp1r3eQ8BRJ4 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.59■■□□□ 1.53
Ppp1r3eQ8BRJ4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ppp1r3eQ8BRJ4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ppp1r3eQ8BRJ4 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.58■■□□□ 1.53
Ppp1r3eQ8BRJ4 Rab21-202ENSMUST00000218831 843 ntBASIC24.58■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms