Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Smco3Q8BQM7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Smco3Q8BQM7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.13■■□□□ 1.13
Smco3Q8BQM7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Smco3Q8BQM7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smco3Q8BQM7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smco3Q8BQM7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smco3Q8BQM7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smco3Q8BQM7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Smco3Q8BQM7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smco3Q8BQM7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Smco3Q8BQM7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Smco3Q8BQM7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Smco3Q8BQM7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Smco3Q8BQM7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Smco3Q8BQM7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Smco3Q8BQM7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Smco3Q8BQM7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.95■■□□□ 1.11
Smco3Q8BQM7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Smco3Q8BQM7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smco3Q8BQM7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smco3Q8BQM7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.92■■□□□ 1.1
Smco3Q8BQM7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Smco3Q8BQM7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smco3Q8BQM7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smco3Q8BQM7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.8■■□□□ 1.08
Smco3Q8BQM7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Smco3Q8BQM7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smco3Q8BQM7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smco3Q8BQM7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.78■■□□□ 1.08
Smco3Q8BQM7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Smco3Q8BQM7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smco3Q8BQM7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smco3Q8BQM7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smco3Q8BQM7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smco3Q8BQM7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smco3Q8BQM7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smco3Q8BQM7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smco3Q8BQM7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Smco3Q8BQM7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.6■■□□□ 1.05
Smco3Q8BQM7 Gm27325-201ENSMUST00000175467 74 ntBASIC21.6■■□□□ 1.05
Smco3Q8BQM7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smco3Q8BQM7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smco3Q8BQM7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smco3Q8BQM7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smco3Q8BQM7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smco3Q8BQM7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.54■■□□□ 1.04
Smco3Q8BQM7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smco3Q8BQM7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smco3Q8BQM7 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.5■■□□□ 1.03
Smco3Q8BQM7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Smco3Q8BQM7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smco3Q8BQM7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smco3Q8BQM7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Smco3Q8BQM7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smco3Q8BQM7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Smco3Q8BQM7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smco3Q8BQM7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Smco3Q8BQM7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smco3Q8BQM7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smco3Q8BQM7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Smco3Q8BQM7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smco3Q8BQM7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smco3Q8BQM7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smco3Q8BQM7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smco3Q8BQM7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smco3Q8BQM7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smco3Q8BQM7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smco3Q8BQM7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smco3Q8BQM7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.32■■□□□ 1
Smco3Q8BQM7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.3■■□□□ 1
Smco3Q8BQM7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Smco3Q8BQM7 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.29■■□□□ 1
Smco3Q8BQM7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.29■■□□□ 1
Smco3Q8BQM7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smco3Q8BQM7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Smco3Q8BQM7 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.27■■□□□ 1
Smco3Q8BQM7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smco3Q8BQM7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smco3Q8BQM7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smco3Q8BQM7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smco3Q8BQM7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smco3Q8BQM7 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smco3Q8BQM7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Smco3Q8BQM7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smco3Q8BQM7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smco3Q8BQM7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smco3Q8BQM7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smco3Q8BQM7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smco3Q8BQM7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.17■□□□□ 0.98
Smco3Q8BQM7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smco3Q8BQM7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smco3Q8BQM7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smco3Q8BQM7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Smco3Q8BQM7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smco3Q8BQM7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smco3Q8BQM7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Smco3Q8BQM7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smco3Q8BQM7 Gm25238-201ENSMUST00000174914 89 ntBASIC21.08■□□□□ 0.97
Smco3Q8BQM7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms