Protein–RNA interactions for Protein: Q8BKN5

Tubgcp5, Gamma-tubulin complex component 5, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp5Q8BKN5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Tubgcp5Q8BKN5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Tubgcp5Q8BKN5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.08■■□□□ 1.93
Tubgcp5Q8BKN5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.08■■□□□ 1.93
Tubgcp5Q8BKN5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
Tubgcp5Q8BKN5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Tubgcp5Q8BKN5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Tubgcp5Q8BKN5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
Tubgcp5Q8BKN5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Tubgcp5Q8BKN5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Tubgcp5Q8BKN5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Tubgcp5Q8BKN5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Tubgcp5Q8BKN5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Tubgcp5Q8BKN5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Tubgcp5Q8BKN5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.94■■□□□ 1.9
Tubgcp5Q8BKN5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Tubgcp5Q8BKN5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Tubgcp5Q8BKN5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
Tubgcp5Q8BKN5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Tubgcp5Q8BKN5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Tubgcp5Q8BKN5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Tubgcp5Q8BKN5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Tubgcp5Q8BKN5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.82■■□□□ 1.88
Tubgcp5Q8BKN5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Tubgcp5Q8BKN5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Tubgcp5Q8BKN5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Tubgcp5Q8BKN5 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.7■■□□□ 1.87
Tubgcp5Q8BKN5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.7■■□□□ 1.86
Tubgcp5Q8BKN5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.66■■□□□ 1.86
Tubgcp5Q8BKN5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Tubgcp5Q8BKN5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Tubgcp5Q8BKN5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Tubgcp5Q8BKN5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.51■■□□□ 1.83
Tubgcp5Q8BKN5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
Tubgcp5Q8BKN5 Rab21-202ENSMUST00000218831 843 ntBASIC26.46■■□□□ 1.83
Tubgcp5Q8BKN5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Tubgcp5Q8BKN5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.44■■□□□ 1.82
Tubgcp5Q8BKN5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
Tubgcp5Q8BKN5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Tubgcp5Q8BKN5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Tubgcp5Q8BKN5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Tubgcp5Q8BKN5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Tubgcp5Q8BKN5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.31■■□□□ 1.8
Tubgcp5Q8BKN5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Tubgcp5Q8BKN5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Tubgcp5Q8BKN5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Tubgcp5Q8BKN5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
Tubgcp5Q8BKN5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.29■■□□□ 1.8
Tubgcp5Q8BKN5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Tubgcp5Q8BKN5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Tubgcp5Q8BKN5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Tubgcp5Q8BKN5 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.24■■□□□ 1.79
Tubgcp5Q8BKN5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tubgcp5Q8BKN5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Tubgcp5Q8BKN5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Tubgcp5Q8BKN5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Tubgcp5Q8BKN5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.17■■□□□ 1.78
Tubgcp5Q8BKN5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.15■■□□□ 1.78
Tubgcp5Q8BKN5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tubgcp5Q8BKN5 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.14■■□□□ 1.78
Tubgcp5Q8BKN5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.77
Tubgcp5Q8BKN5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Tubgcp5Q8BKN5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Tubgcp5Q8BKN5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Tubgcp5Q8BKN5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tubgcp5Q8BKN5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Tubgcp5Q8BKN5 Zxda-201ENSMUST00000117281 2621 ntBASIC26.07■■□□□ 1.76
Tubgcp5Q8BKN5 Gm25262-201ENSMUST00000174934 133 ntBASIC26.07■■□□□ 1.76
Tubgcp5Q8BKN5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Tubgcp5Q8BKN5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Tubgcp5Q8BKN5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Tubgcp5Q8BKN5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Tubgcp5Q8BKN5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Tubgcp5Q8BKN5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26■■□□□ 1.75
Tubgcp5Q8BKN5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
Tubgcp5Q8BKN5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Tubgcp5Q8BKN5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.98■■□□□ 1.75
Tubgcp5Q8BKN5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Tubgcp5Q8BKN5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Tubgcp5Q8BKN5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Tubgcp5Q8BKN5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Tubgcp5Q8BKN5 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.94■■□□□ 1.74
Tubgcp5Q8BKN5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Tubgcp5Q8BKN5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.93■■□□□ 1.74
Tubgcp5Q8BKN5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Tubgcp5Q8BKN5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Tubgcp5Q8BKN5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.91■■□□□ 1.74
Tubgcp5Q8BKN5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
Tubgcp5Q8BKN5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Tubgcp5Q8BKN5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Tubgcp5Q8BKN5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Tubgcp5Q8BKN5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Tubgcp5Q8BKN5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Tubgcp5Q8BKN5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Tubgcp5Q8BKN5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Tubgcp5Q8BKN5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Tubgcp5Q8BKN5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
Tubgcp5Q8BKN5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.8■■□□□ 1.72
Tubgcp5Q8BKN5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Tubgcp5Q8BKN5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms