Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rnf38Q8BI21 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rnf38Q8BI21 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rnf38Q8BI21 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
Rnf38Q8BI21 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.6■■□□□ 1.85
Rnf38Q8BI21 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rnf38Q8BI21 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Rnf38Q8BI21 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Rnf38Q8BI21 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Rnf38Q8BI21 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rnf38Q8BI21 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.37■■□□□ 1.81
Rnf38Q8BI21 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rnf38Q8BI21 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rnf38Q8BI21 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Rnf38Q8BI21 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.34■■□□□ 1.81
Rnf38Q8BI21 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
Rnf38Q8BI21 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.32■■□□□ 1.8
Rnf38Q8BI21 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rnf38Q8BI21 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rnf38Q8BI21 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.24■■□□□ 1.79
Rnf38Q8BI21 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
Rnf38Q8BI21 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rnf38Q8BI21 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Rnf38Q8BI21 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rnf38Q8BI21 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rnf38Q8BI21 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rnf38Q8BI21 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rnf38Q8BI21 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rnf38Q8BI21 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Rnf38Q8BI21 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.09■■□□□ 1.77
Rnf38Q8BI21 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rnf38Q8BI21 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.04■■□□□ 1.76
Rnf38Q8BI21 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Rnf38Q8BI21 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Rnf38Q8BI21 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.99■■□□□ 1.75
Rnf38Q8BI21 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.99■■□□□ 1.75
Rnf38Q8BI21 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.96■■□□□ 1.75
Rnf38Q8BI21 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rnf38Q8BI21 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Rnf38Q8BI21 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rnf38Q8BI21 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Rnf38Q8BI21 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rnf38Q8BI21 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Rnf38Q8BI21 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.82■■□□□ 1.72
Rnf38Q8BI21 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Rnf38Q8BI21 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rnf38Q8BI21 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.8■■□□□ 1.72
Rnf38Q8BI21 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
Rnf38Q8BI21 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Rnf38Q8BI21 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Rnf38Q8BI21 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Rnf38Q8BI21 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Rnf38Q8BI21 Rab21-202ENSMUST00000218831 843 ntBASIC25.73■■□□□ 1.71
Rnf38Q8BI21 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
Rnf38Q8BI21 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Rnf38Q8BI21 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Rnf38Q8BI21 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.68■■□□□ 1.7
Rnf38Q8BI21 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Rnf38Q8BI21 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rnf38Q8BI21 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Rnf38Q8BI21 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rnf38Q8BI21 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Rnf38Q8BI21 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Rnf38Q8BI21 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Rnf38Q8BI21 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Rnf38Q8BI21 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Rnf38Q8BI21 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.63■■□□□ 1.69
Rnf38Q8BI21 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rnf38Q8BI21 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.6■■□□□ 1.69
Rnf38Q8BI21 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rnf38Q8BI21 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Rnf38Q8BI21 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Rnf38Q8BI21 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.57■■□□□ 1.68
Rnf38Q8BI21 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rnf38Q8BI21 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.55■■□□□ 1.68
Rnf38Q8BI21 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.53■■□□□ 1.68
Rnf38Q8BI21 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.52■■□□□ 1.68
Rnf38Q8BI21 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Rnf38Q8BI21 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.49■■□□□ 1.67
Rnf38Q8BI21 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Rnf38Q8BI21 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rnf38Q8BI21 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.67
Rnf38Q8BI21 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Rnf38Q8BI21 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Rnf38Q8BI21 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Rnf38Q8BI21 Gm25262-201ENSMUST00000174934 133 ntBASIC25.43■■□□□ 1.66
Rnf38Q8BI21 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf38Q8BI21 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf38Q8BI21 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rnf38Q8BI21 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Rnf38Q8BI21 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rnf38Q8BI21 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Rnf38Q8BI21 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Rnf38Q8BI21 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rnf38Q8BI21 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Rnf38Q8BI21 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rnf38Q8BI21 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rnf38Q8BI21 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rnf38Q8BI21 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Rnf38Q8BI21 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.25■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms