Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Slc5a7Q8BGY9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Slc5a7Q8BGY9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Slc5a7Q8BGY9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Slc5a7Q8BGY9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Slc5a7Q8BGY9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Slc5a7Q8BGY9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Slc5a7Q8BGY9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Slc5a7Q8BGY9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Slc5a7Q8BGY9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Slc5a7Q8BGY9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Slc5a7Q8BGY9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Slc5a7Q8BGY9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.77■■□□□ 1.4
Slc5a7Q8BGY9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Slc5a7Q8BGY9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Slc5a7Q8BGY9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.71■■□□□ 1.39
Slc5a7Q8BGY9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Slc5a7Q8BGY9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Slc5a7Q8BGY9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Slc5a7Q8BGY9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Slc5a7Q8BGY9 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.64■■□□□ 1.38
Slc5a7Q8BGY9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
Slc5a7Q8BGY9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.64■■□□□ 1.37
Slc5a7Q8BGY9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.62■■□□□ 1.37
Slc5a7Q8BGY9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Slc5a7Q8BGY9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Slc5a7Q8BGY9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Slc5a7Q8BGY9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Slc5a7Q8BGY9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Slc5a7Q8BGY9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.48■■□□□ 1.35
Slc5a7Q8BGY9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Slc5a7Q8BGY9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Slc5a7Q8BGY9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Slc5a7Q8BGY9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Slc5a7Q8BGY9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Slc5a7Q8BGY9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Slc5a7Q8BGY9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Slc5a7Q8BGY9 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.4■■□□□ 1.34
Slc5a7Q8BGY9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Slc5a7Q8BGY9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
Slc5a7Q8BGY9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Slc5a7Q8BGY9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Slc5a7Q8BGY9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Slc5a7Q8BGY9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Slc5a7Q8BGY9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Slc5a7Q8BGY9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slc5a7Q8BGY9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slc5a7Q8BGY9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Slc5a7Q8BGY9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Slc5a7Q8BGY9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Slc5a7Q8BGY9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Slc5a7Q8BGY9 Zxda-201ENSMUST00000117281 2621 ntBASIC23.26■■□□□ 1.31
Slc5a7Q8BGY9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.26■■□□□ 1.31
Slc5a7Q8BGY9 Gm27325-201ENSMUST00000175467 74 ntBASIC23.24■■□□□ 1.31
Slc5a7Q8BGY9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.23■■□□□ 1.31
Slc5a7Q8BGY9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Slc5a7Q8BGY9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Slc5a7Q8BGY9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Slc5a7Q8BGY9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Slc5a7Q8BGY9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Slc5a7Q8BGY9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Slc5a7Q8BGY9 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.18■■□□□ 1.3
Slc5a7Q8BGY9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slc5a7Q8BGY9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Slc5a7Q8BGY9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Slc5a7Q8BGY9 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.12■■□□□ 1.29
Slc5a7Q8BGY9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc5a7Q8BGY9 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.1■■□□□ 1.29
Slc5a7Q8BGY9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Slc5a7Q8BGY9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Slc5a7Q8BGY9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Slc5a7Q8BGY9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Slc5a7Q8BGY9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc5a7Q8BGY9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc5a7Q8BGY9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slc5a7Q8BGY9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Slc5a7Q8BGY9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Slc5a7Q8BGY9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23■■□□□ 1.27
Slc5a7Q8BGY9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Slc5a7Q8BGY9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.99■■□□□ 1.27
Slc5a7Q8BGY9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Slc5a7Q8BGY9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Slc5a7Q8BGY9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Slc5a7Q8BGY9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Slc5a7Q8BGY9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Slc5a7Q8BGY9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Slc5a7Q8BGY9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Slc5a7Q8BGY9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Slc5a7Q8BGY9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Slc5a7Q8BGY9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Slc5a7Q8BGY9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Slc5a7Q8BGY9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Slc5a7Q8BGY9 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
Slc5a7Q8BGY9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Slc5a7Q8BGY9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Slc5a7Q8BGY9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.84■■□□□ 1.25
Slc5a7Q8BGY9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Slc5a7Q8BGY9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Slc5a7Q8BGY9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Slc5a7Q8BGY9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms