Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Zc3hc1Q80YV2 Gm27325-201ENSMUST00000175467 74 ntBASIC25.01■■□□□ 1.59
Zc3hc1Q80YV2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.99■■□□□ 1.59
Zc3hc1Q80YV2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Zc3hc1Q80YV2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Zc3hc1Q80YV2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Zc3hc1Q80YV2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Zc3hc1Q80YV2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Zc3hc1Q80YV2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.79■■□□□ 1.56
Zc3hc1Q80YV2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Zc3hc1Q80YV2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Zc3hc1Q80YV2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.76■■□□□ 1.55
Zc3hc1Q80YV2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Zc3hc1Q80YV2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
Zc3hc1Q80YV2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Zc3hc1Q80YV2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Zc3hc1Q80YV2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.74■■□□□ 1.55
Zc3hc1Q80YV2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Zc3hc1Q80YV2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Zc3hc1Q80YV2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Zc3hc1Q80YV2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Zc3hc1Q80YV2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.63■■□□□ 1.53
Zc3hc1Q80YV2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Zc3hc1Q80YV2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.56■■□□□ 1.52
Zc3hc1Q80YV2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Zc3hc1Q80YV2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.56■■□□□ 1.52
Zc3hc1Q80YV2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Zc3hc1Q80YV2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Zc3hc1Q80YV2 Gm25238-201ENSMUST00000174914 89 ntBASIC24.53■■□□□ 1.52
Zc3hc1Q80YV2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Zc3hc1Q80YV2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Zc3hc1Q80YV2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Zc3hc1Q80YV2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Zc3hc1Q80YV2 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.44■■□□□ 1.5
Zc3hc1Q80YV2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.43■■□□□ 1.5
Zc3hc1Q80YV2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.42■■□□□ 1.5
Zc3hc1Q80YV2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Zc3hc1Q80YV2 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.4■■□□□ 1.5
Zc3hc1Q80YV2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Zc3hc1Q80YV2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.39■■□□□ 1.49
Zc3hc1Q80YV2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Zc3hc1Q80YV2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Zc3hc1Q80YV2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Zc3hc1Q80YV2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Zc3hc1Q80YV2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Zc3hc1Q80YV2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Zc3hc1Q80YV2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Zc3hc1Q80YV2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Zc3hc1Q80YV2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
Zc3hc1Q80YV2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Zc3hc1Q80YV2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.26■■□□□ 1.47
Zc3hc1Q80YV2 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.24■■□□□ 1.47
Zc3hc1Q80YV2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
Zc3hc1Q80YV2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Zc3hc1Q80YV2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.16■■□□□ 1.46
Zc3hc1Q80YV2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.16■■□□□ 1.46
Zc3hc1Q80YV2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Zc3hc1Q80YV2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
Zc3hc1Q80YV2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Zc3hc1Q80YV2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Zc3hc1Q80YV2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Zc3hc1Q80YV2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Zc3hc1Q80YV2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Zc3hc1Q80YV2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Zc3hc1Q80YV2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Zc3hc1Q80YV2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Zc3hc1Q80YV2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Zc3hc1Q80YV2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Zc3hc1Q80YV2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Zc3hc1Q80YV2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.03■■□□□ 1.44
Zc3hc1Q80YV2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Zc3hc1Q80YV2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
Zc3hc1Q80YV2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Zc3hc1Q80YV2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.99■■□□□ 1.43
Zc3hc1Q80YV2 Rab21-202ENSMUST00000218831 843 ntBASIC23.98■■□□□ 1.43
Zc3hc1Q80YV2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Zc3hc1Q80YV2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.97■■□□□ 1.43
Zc3hc1Q80YV2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.95■■□□□ 1.42
Zc3hc1Q80YV2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Zc3hc1Q80YV2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Zc3hc1Q80YV2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.94■■□□□ 1.42
Zc3hc1Q80YV2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Zc3hc1Q80YV2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Zc3hc1Q80YV2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Zc3hc1Q80YV2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Zc3hc1Q80YV2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Zc3hc1Q80YV2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Zc3hc1Q80YV2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Zc3hc1Q80YV2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Zc3hc1Q80YV2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Zc3hc1Q80YV2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
Zc3hc1Q80YV2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Zc3hc1Q80YV2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Zc3hc1Q80YV2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Zc3hc1Q80YV2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Zc3hc1Q80YV2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Zc3hc1Q80YV2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.78■■□□□ 1.4
Zc3hc1Q80YV2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Zc3hc1Q80YV2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Zc3hc1Q80YV2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms