Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim36Q80WG7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim36Q80WG7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim36Q80WG7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim36Q80WG7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Trim36Q80WG7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Trim36Q80WG7 Rab21-202ENSMUST00000218831 843 ntBASIC26.1■■□□□ 1.77
Trim36Q80WG7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Trim36Q80WG7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.02■■□□□ 1.76
Trim36Q80WG7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim36Q80WG7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim36Q80WG7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Trim36Q80WG7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Trim36Q80WG7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Trim36Q80WG7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Trim36Q80WG7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Trim36Q80WG7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Trim36Q80WG7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.84■■□□□ 1.73
Trim36Q80WG7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Trim36Q80WG7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Trim36Q80WG7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.83■■□□□ 1.73
Trim36Q80WG7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trim36Q80WG7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trim36Q80WG7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Trim36Q80WG7 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.81■■□□□ 1.72
Trim36Q80WG7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.8■■□□□ 1.72
Trim36Q80WG7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Trim36Q80WG7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.77■■□□□ 1.72
Trim36Q80WG7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Trim36Q80WG7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Trim36Q80WG7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Trim36Q80WG7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim36Q80WG7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Trim36Q80WG7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trim36Q80WG7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trim36Q80WG7 Gm26115-201ENSMUST00000175605 87 ntBASIC25.63■■□□□ 1.69
Trim36Q80WG7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trim36Q80WG7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trim36Q80WG7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.6■■□□□ 1.69
Trim36Q80WG7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.56■■□□□ 1.68
Trim36Q80WG7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim36Q80WG7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim36Q80WG7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Trim36Q80WG7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Trim36Q80WG7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim36Q80WG7 Gm8109-201ENSMUST00000194076 746 ntBASIC25.52■■□□□ 1.68
Trim36Q80WG7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Trim36Q80WG7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Trim36Q80WG7 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Trim36Q80WG7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.43■■□□□ 1.66
Trim36Q80WG7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Trim36Q80WG7 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Trim36Q80WG7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trim36Q80WG7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Trim36Q80WG7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Trim36Q80WG7 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trim36Q80WG7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
Trim36Q80WG7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.31■■□□□ 1.64
Trim36Q80WG7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trim36Q80WG7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Trim36Q80WG7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.3■■□□□ 1.64
Trim36Q80WG7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.3■■□□□ 1.64
Trim36Q80WG7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Trim36Q80WG7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Trim36Q80WG7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Trim36Q80WG7 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Trim36Q80WG7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.19■■□□□ 1.62
Trim36Q80WG7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Trim36Q80WG7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trim36Q80WG7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Trim36Q80WG7 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.16■■□□□ 1.62
Trim36Q80WG7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trim36Q80WG7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Trim36Q80WG7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Trim36Q80WG7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Trim36Q80WG7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.05■■□□□ 1.6
Trim36Q80WG7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Trim36Q80WG7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.04■■□□□ 1.6
Trim36Q80WG7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Trim36Q80WG7 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.03■■□□□ 1.6
Trim36Q80WG7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Trim36Q80WG7 Zfp131-207ENSMUST00000224946 1783 ntBASIC25.02■■□□□ 1.6
Trim36Q80WG7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
Trim36Q80WG7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Trim36Q80WG7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Trim36Q80WG7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Trim36Q80WG7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
Trim36Q80WG7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Trim36Q80WG7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
Trim36Q80WG7 Gm27322-201ENSMUST00000184007 104 ntBASIC24.95■■□□□ 1.58
Trim36Q80WG7 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Trim36Q80WG7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.93■■□□□ 1.58
Trim36Q80WG7 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Trim36Q80WG7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.91■■□□□ 1.58
Trim36Q80WG7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Trim36Q80WG7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trim36Q80WG7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trim36Q80WG7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Trim36Q80WG7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Trim36Q80WG7 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.86■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms