Protein–RNA interactions for Protein: Q80VG1

Scml4, Sex comb on midleg-like protein 4, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scml4Q80VG1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Scml4Q80VG1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Scml4Q80VG1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Scml4Q80VG1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.25■■□□□ 1.31
Scml4Q80VG1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Scml4Q80VG1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Scml4Q80VG1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
Scml4Q80VG1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Scml4Q80VG1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Scml4Q80VG1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Scml4Q80VG1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Scml4Q80VG1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Scml4Q80VG1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Scml4Q80VG1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Scml4Q80VG1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Scml4Q80VG1 Zxda-201ENSMUST00000117281 2621 ntBASIC23■■□□□ 1.27
Scml4Q80VG1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Scml4Q80VG1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Scml4Q80VG1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Scml4Q80VG1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Scml4Q80VG1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Scml4Q80VG1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Scml4Q80VG1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Scml4Q80VG1 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.92■■□□□ 1.26
Scml4Q80VG1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.9■■□□□ 1.26
Scml4Q80VG1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.25
Scml4Q80VG1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Scml4Q80VG1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Scml4Q80VG1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Scml4Q80VG1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Scml4Q80VG1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Scml4Q80VG1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Scml4Q80VG1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Scml4Q80VG1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Scml4Q80VG1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Scml4Q80VG1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Scml4Q80VG1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Scml4Q80VG1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Scml4Q80VG1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.71■■□□□ 1.23
Scml4Q80VG1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Scml4Q80VG1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Scml4Q80VG1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Scml4Q80VG1 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.64■■□□□ 1.21
Scml4Q80VG1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Scml4Q80VG1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.62■■□□□ 1.21
Scml4Q80VG1 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.61■■□□□ 1.21
Scml4Q80VG1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scml4Q80VG1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Scml4Q80VG1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Scml4Q80VG1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scml4Q80VG1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Scml4Q80VG1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.59■■□□□ 1.21
Scml4Q80VG1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.59■■□□□ 1.21
Scml4Q80VG1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Scml4Q80VG1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Scml4Q80VG1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Scml4Q80VG1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Scml4Q80VG1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Scml4Q80VG1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Scml4Q80VG1 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.53■■□□□ 1.2
Scml4Q80VG1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Scml4Q80VG1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Scml4Q80VG1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Scml4Q80VG1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scml4Q80VG1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Scml4Q80VG1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Scml4Q80VG1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scml4Q80VG1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scml4Q80VG1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Scml4Q80VG1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scml4Q80VG1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scml4Q80VG1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scml4Q80VG1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.43■■□□□ 1.18
Scml4Q80VG1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Scml4Q80VG1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Scml4Q80VG1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scml4Q80VG1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Scml4Q80VG1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scml4Q80VG1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Scml4Q80VG1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scml4Q80VG1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Scml4Q80VG1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Scml4Q80VG1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Scml4Q80VG1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Scml4Q80VG1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scml4Q80VG1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Scml4Q80VG1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.29■■□□□ 1.16
Scml4Q80VG1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
Scml4Q80VG1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scml4Q80VG1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Scml4Q80VG1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.26■■□□□ 1.15
Scml4Q80VG1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Scml4Q80VG1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scml4Q80VG1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scml4Q80VG1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Scml4Q80VG1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
Scml4Q80VG1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Scml4Q80VG1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Scml4Q80VG1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Scml4Q80VG1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms