Protein–RNA interactions for Protein: Q6WKZ8

Ubr2, E3 ubiquitin-protein ligase UBR2, mousemouse

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2Q6WKZ8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC36.48■■■■□ 3.43
Ubr2Q6WKZ8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC36.48■■■■□ 3.43
Ubr2Q6WKZ8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC36.35■■■■□ 3.41
Ubr2Q6WKZ8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC36.32■■■■□ 3.4
Ubr2Q6WKZ8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC36.31■■■■□ 3.4
Ubr2Q6WKZ8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
Ubr2Q6WKZ8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
Ubr2Q6WKZ8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC36.27■■■■□ 3.4
Ubr2Q6WKZ8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC36.1■■■■□ 3.37
Ubr2Q6WKZ8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
Ubr2Q6WKZ8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC36.09■■■■□ 3.37
Ubr2Q6WKZ8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
Ubr2Q6WKZ8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
Ubr2Q6WKZ8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC35.97■■■■□ 3.35
Ubr2Q6WKZ8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
Ubr2Q6WKZ8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC35.95■■■■□ 3.35
Ubr2Q6WKZ8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
Ubr2Q6WKZ8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Ubr2Q6WKZ8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
Ubr2Q6WKZ8 Gm27322-201ENSMUST00000184007 104 ntBASIC35.81■■■■□ 3.32
Ubr2Q6WKZ8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC35.78■■■■□ 3.32
Ubr2Q6WKZ8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
Ubr2Q6WKZ8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC35.74■■■■□ 3.31
Ubr2Q6WKZ8 Gm24804-201ENSMUST00000174982 85 ntBASIC35.74■■■■□ 3.31
Ubr2Q6WKZ8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Ubr2Q6WKZ8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
Ubr2Q6WKZ8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC35.58■■■■□ 3.29
Ubr2Q6WKZ8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC35.56■■■■□ 3.28
Ubr2Q6WKZ8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
Ubr2Q6WKZ8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC35.51■■■■□ 3.28
Ubr2Q6WKZ8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
Ubr2Q6WKZ8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
Ubr2Q6WKZ8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
Ubr2Q6WKZ8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Ubr2Q6WKZ8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC35.43■■■■□ 3.26
Ubr2Q6WKZ8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC35.43■■■■□ 3.26
Ubr2Q6WKZ8 AL845457.1-201ENSMUST00000197244 68 ntBASIC35.41■■■■□ 3.26
Ubr2Q6WKZ8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
Ubr2Q6WKZ8 AC166822.3-201ENSMUST00000227394 661 ntBASIC35.36■■■■□ 3.25
Ubr2Q6WKZ8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
Ubr2Q6WKZ8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Ubr2Q6WKZ8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Ubr2Q6WKZ8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC35.31■■■■□ 3.24
Ubr2Q6WKZ8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC35.31■■■■□ 3.24
Ubr2Q6WKZ8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC35.29■■■■□ 3.24
Ubr2Q6WKZ8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
Ubr2Q6WKZ8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
Ubr2Q6WKZ8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC35.2■■■■□ 3.23
Ubr2Q6WKZ8 Zfp131-207ENSMUST00000224946 1783 ntBASIC35.18■■■■□ 3.22
Ubr2Q6WKZ8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
Ubr2Q6WKZ8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
Ubr2Q6WKZ8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Ubr2Q6WKZ8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Ubr2Q6WKZ8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Ubr2Q6WKZ8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
Ubr2Q6WKZ8 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Ubr2Q6WKZ8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Ubr2Q6WKZ8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
Ubr2Q6WKZ8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
Ubr2Q6WKZ8 Zfp131-205ENSMUST00000223812 663 ntBASIC35.02■■■■□ 3.2
Ubr2Q6WKZ8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Ubr2Q6WKZ8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC34.99■■■■□ 3.19
Ubr2Q6WKZ8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Ubr2Q6WKZ8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
Ubr2Q6WKZ8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Ubr2Q6WKZ8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
Ubr2Q6WKZ8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
Ubr2Q6WKZ8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC34.81■■■■□ 3.16
Ubr2Q6WKZ8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC34.78■■■■□ 3.16
Ubr2Q6WKZ8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Ubr2Q6WKZ8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC34.72■■■■□ 3.15
Ubr2Q6WKZ8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
Ubr2Q6WKZ8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
Ubr2Q6WKZ8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
Ubr2Q6WKZ8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC34.67■■■■□ 3.14
Ubr2Q6WKZ8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
Ubr2Q6WKZ8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC34.64■■■■□ 3.14
Ubr2Q6WKZ8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
Ubr2Q6WKZ8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Ubr2Q6WKZ8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC34.52■■■■□ 3.12
Ubr2Q6WKZ8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC34.51■■■■□ 3.11
Ubr2Q6WKZ8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC34.5■■■■□ 3.11
Ubr2Q6WKZ8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Ubr2Q6WKZ8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC34.48■■■■□ 3.11
Ubr2Q6WKZ8 Peli2-204ENSMUST00000226513 1320 ntBASIC34.47■■■■□ 3.11
Ubr2Q6WKZ8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
Ubr2Q6WKZ8 Mipep-204ENSMUST00000225043 1548 ntBASIC34.44■■■■□ 3.1
Ubr2Q6WKZ8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC34.43■■■■□ 3.1
Ubr2Q6WKZ8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC34.42■■■■□ 3.1
Ubr2Q6WKZ8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Ubr2Q6WKZ8 Gm16148-201ENSMUST00000119653 893 ntBASIC34.39■■■■□ 3.1
Ubr2Q6WKZ8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Ubr2Q6WKZ8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Ubr2Q6WKZ8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
Ubr2Q6WKZ8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
Ubr2Q6WKZ8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC34.34■■■■□ 3.09
Ubr2Q6WKZ8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
Ubr2Q6WKZ8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
Ubr2Q6WKZ8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC34.3■■■■□ 3.08
Ubr2Q6WKZ8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC34.29■■■■□ 3.08
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms