Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Dhx40Q6PE54 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Dhx40Q6PE54 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Dhx40Q6PE54 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
Dhx40Q6PE54 Gm27325-201ENSMUST00000175467 74 ntBASIC30.71■■■□□ 2.51
Dhx40Q6PE54 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.7■■■□□ 2.51
Dhx40Q6PE54 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
Dhx40Q6PE54 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Dhx40Q6PE54 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Dhx40Q6PE54 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Dhx40Q6PE54 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Dhx40Q6PE54 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
Dhx40Q6PE54 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Dhx40Q6PE54 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Dhx40Q6PE54 Gm25238-201ENSMUST00000174914 89 ntBASIC30.46■■■□□ 2.47
Dhx40Q6PE54 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
Dhx40Q6PE54 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Dhx40Q6PE54 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.41■■■□□ 2.46
Dhx40Q6PE54 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.41■■■□□ 2.46
Dhx40Q6PE54 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Dhx40Q6PE54 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Dhx40Q6PE54 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Dhx40Q6PE54 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Dhx40Q6PE54 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.31■■■□□ 2.44
Dhx40Q6PE54 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Dhx40Q6PE54 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Dhx40Q6PE54 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.25■■■□□ 2.43
Dhx40Q6PE54 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Dhx40Q6PE54 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Dhx40Q6PE54 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Dhx40Q6PE54 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.15■■■□□ 2.42
Dhx40Q6PE54 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.12■■■□□ 2.41
Dhx40Q6PE54 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Dhx40Q6PE54 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.03■■■□□ 2.4
Dhx40Q6PE54 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Dhx40Q6PE54 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Dhx40Q6PE54 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
Dhx40Q6PE54 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Dhx40Q6PE54 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Dhx40Q6PE54 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.99■■■□□ 2.39
Dhx40Q6PE54 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Dhx40Q6PE54 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.98■■■□□ 2.39
Dhx40Q6PE54 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Dhx40Q6PE54 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Dhx40Q6PE54 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.91■■■□□ 2.38
Dhx40Q6PE54 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Dhx40Q6PE54 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Dhx40Q6PE54 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
Dhx40Q6PE54 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Dhx40Q6PE54 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.83■■■□□ 2.37
Dhx40Q6PE54 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Dhx40Q6PE54 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.82■■■□□ 2.36
Dhx40Q6PE54 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
Dhx40Q6PE54 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Dhx40Q6PE54 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Dhx40Q6PE54 Gm6658-202ENSMUST00000209493 1885 ntBASIC29.74■■■□□ 2.35
Dhx40Q6PE54 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Dhx40Q6PE54 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Dhx40Q6PE54 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.7■■■□□ 2.35
Dhx40Q6PE54 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
Dhx40Q6PE54 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Dhx40Q6PE54 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
Dhx40Q6PE54 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.63■■■□□ 2.33
Dhx40Q6PE54 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Dhx40Q6PE54 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Dhx40Q6PE54 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
Dhx40Q6PE54 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.6■■■□□ 2.33
Dhx40Q6PE54 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Dhx40Q6PE54 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Dhx40Q6PE54 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29.52■■■□□ 2.32
Dhx40Q6PE54 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Dhx40Q6PE54 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.5■■■□□ 2.31
Dhx40Q6PE54 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Dhx40Q6PE54 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.47■■■□□ 2.31
Dhx40Q6PE54 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Dhx40Q6PE54 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Dhx40Q6PE54 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
Dhx40Q6PE54 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.45■■■□□ 2.3
Dhx40Q6PE54 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Dhx40Q6PE54 Rab21-202ENSMUST00000218831 843 ntBASIC29.43■■■□□ 2.3
Dhx40Q6PE54 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
Dhx40Q6PE54 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
Dhx40Q6PE54 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Dhx40Q6PE54 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
Dhx40Q6PE54 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Dhx40Q6PE54 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Dhx40Q6PE54 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Dhx40Q6PE54 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Dhx40Q6PE54 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Dhx40Q6PE54 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Dhx40Q6PE54 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.31■■■□□ 2.28
Dhx40Q6PE54 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
Dhx40Q6PE54 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
Dhx40Q6PE54 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Dhx40Q6PE54 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
Dhx40Q6PE54 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Dhx40Q6PE54 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Dhx40Q6PE54 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.24■■■□□ 2.27
Dhx40Q6PE54 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
Dhx40Q6PE54 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms