Protein–RNA interactions for Protein: Q61268

Apoc4, Apolipoprotein C-IV, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc4Q61268 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Apoc4Q61268 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Apoc4Q61268 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Apoc4Q61268 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Apoc4Q61268 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Apoc4Q61268 Gm15042-201ENSMUST00000120212 883 ntBASIC17.1■□□□□ 0.33
Apoc4Q61268 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Apoc4Q61268 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Apoc4Q61268 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Apoc4Q61268 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Apoc4Q61268 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Apoc4Q61268 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Apoc4Q61268 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Apoc4Q61268 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Apoc4Q61268 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Apoc4Q61268 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17■□□□□ 0.31
Apoc4Q61268 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Apoc4Q61268 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Apoc4Q61268 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Apoc4Q61268 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Apoc4Q61268 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Apoc4Q61268 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Apoc4Q61268 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Apoc4Q61268 Gm10524-201ENSMUST00000181931 1893 ntBASIC16.94■□□□□ 0.3
Apoc4Q61268 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
Apoc4Q61268 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Apoc4Q61268 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Apoc4Q61268 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Apoc4Q61268 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC16.87■□□□□ 0.29
Apoc4Q61268 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Apoc4Q61268 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Apoc4Q61268 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
Apoc4Q61268 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Apoc4Q61268 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Apoc4Q61268 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Apoc4Q61268 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Apoc4Q61268 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Apoc4Q61268 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Apoc4Q61268 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Apoc4Q61268 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Apoc4Q61268 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Apoc4Q61268 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Apoc4Q61268 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Apoc4Q61268 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.8■□□□□ 0.28
Apoc4Q61268 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Apoc4Q61268 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Apoc4Q61268 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Apoc4Q61268 Gm9905-201ENSMUST00000065740 1845 ntBASIC16.75■□□□□ 0.27
Apoc4Q61268 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Apoc4Q61268 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Apoc4Q61268 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Apoc4Q61268 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC16.71■□□□□ 0.27
Apoc4Q61268 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Apoc4Q61268 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Apoc4Q61268 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Apoc4Q61268 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Apoc4Q61268 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Apoc4Q61268 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Apoc4Q61268 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Apoc4Q61268 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Apoc4Q61268 Gm6206-201ENSMUST00000133472 2199 ntBASIC16.67■□□□□ 0.26
Apoc4Q61268 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Apoc4Q61268 Gm15045-201ENSMUST00000117359 883 ntBASIC16.63■□□□□ 0.25
Apoc4Q61268 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Apoc4Q61268 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Apoc4Q61268 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Apoc4Q61268 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Apoc4Q61268 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Apoc4Q61268 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Apoc4Q61268 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Apoc4Q61268 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Apoc4Q61268 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Apoc4Q61268 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Apoc4Q61268 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Apoc4Q61268 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Apoc4Q61268 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Apoc4Q61268 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Apoc4Q61268 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Apoc4Q61268 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Apoc4Q61268 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Apoc4Q61268 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Apoc4Q61268 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
Apoc4Q61268 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Apoc4Q61268 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Apoc4Q61268 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Apoc4Q61268 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC16.45■□□□□ 0.22
Apoc4Q61268 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Apoc4Q61268 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Apoc4Q61268 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Apoc4Q61268 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Apoc4Q61268 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Apoc4Q61268 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Apoc4Q61268 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Apoc4Q61268 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Apoc4Q61268 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Apoc4Q61268 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Apoc4Q61268 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Apoc4Q61268 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Apoc4Q61268 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Apoc4Q61268 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms