Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC36.57■■■■□ 3.44
Uspl1Q3ULM6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC36.57■■■■□ 3.44
Uspl1Q3ULM6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC36.56■■■■□ 3.44
Uspl1Q3ULM6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC36.55■■■■□ 3.44
Uspl1Q3ULM6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
Uspl1Q3ULM6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
Uspl1Q3ULM6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
Uspl1Q3ULM6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC36.5■■■■□ 3.43
Uspl1Q3ULM6 Gm25262-201ENSMUST00000174934 133 ntBASIC36.49■■■■□ 3.43
Uspl1Q3ULM6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC36.36■■■■□ 3.41
Uspl1Q3ULM6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
Uspl1Q3ULM6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
Uspl1Q3ULM6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC36.3■■■■□ 3.4
Uspl1Q3ULM6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
Uspl1Q3ULM6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Uspl1Q3ULM6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
Uspl1Q3ULM6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC36.2■■■■□ 3.39
Uspl1Q3ULM6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC36.18■■■■□ 3.38
Uspl1Q3ULM6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC36.16■■■■□ 3.38
Uspl1Q3ULM6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Uspl1Q3ULM6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
Uspl1Q3ULM6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC36.08■■■■□ 3.37
Uspl1Q3ULM6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
Uspl1Q3ULM6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.35
Uspl1Q3ULM6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC35.99■■■■□ 3.35
Uspl1Q3ULM6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
Uspl1Q3ULM6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
Uspl1Q3ULM6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC35.93■■■■□ 3.34
Uspl1Q3ULM6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC35.88■■■■□ 3.33
Uspl1Q3ULM6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
Uspl1Q3ULM6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC35.88■■■■□ 3.33
Uspl1Q3ULM6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC35.87■■■■□ 3.33
Uspl1Q3ULM6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC35.87■■■■□ 3.33
Uspl1Q3ULM6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC35.84■■■■□ 3.33
Uspl1Q3ULM6 Zfp131-207ENSMUST00000224946 1783 ntBASIC35.84■■■■□ 3.33
Uspl1Q3ULM6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
Uspl1Q3ULM6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC35.73■■■■□ 3.31
Uspl1Q3ULM6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Uspl1Q3ULM6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC35.66■■■■□ 3.3
Uspl1Q3ULM6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC35.65■■■■□ 3.3
Uspl1Q3ULM6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC35.62■■■■□ 3.29
Uspl1Q3ULM6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
Uspl1Q3ULM6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
Uspl1Q3ULM6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
Uspl1Q3ULM6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
Uspl1Q3ULM6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC35.55■■■■□ 3.28
Uspl1Q3ULM6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Uspl1Q3ULM6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Uspl1Q3ULM6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
Uspl1Q3ULM6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
Uspl1Q3ULM6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
Uspl1Q3ULM6 Gm17082-201ENSMUST00000166043 1091 ntBASIC35.47■■■■□ 3.27
Uspl1Q3ULM6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
Uspl1Q3ULM6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
Uspl1Q3ULM6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
Uspl1Q3ULM6 AL845457.1-201ENSMUST00000197244 68 ntBASIC35.36■■■■□ 3.25
Uspl1Q3ULM6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Uspl1Q3ULM6 Gm26115-201ENSMUST00000175605 87 ntBASIC35.35■■■■□ 3.25
Uspl1Q3ULM6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Uspl1Q3ULM6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
Uspl1Q3ULM6 Gm8109-201ENSMUST00000194076 746 ntBASIC35.28■■■■□ 3.24
Uspl1Q3ULM6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
Uspl1Q3ULM6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC35.25■■■■□ 3.23
Uspl1Q3ULM6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
Uspl1Q3ULM6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
Uspl1Q3ULM6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC35.23■■■■□ 3.23
Uspl1Q3ULM6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
Uspl1Q3ULM6 Gm27322-201ENSMUST00000184007 104 ntBASIC35.21■■■■□ 3.23
Uspl1Q3ULM6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC35.2■■■■□ 3.23
Uspl1Q3ULM6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
Uspl1Q3ULM6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
Uspl1Q3ULM6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Uspl1Q3ULM6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC35.16■■■■□ 3.22
Uspl1Q3ULM6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC35.15■■■■□ 3.22
Uspl1Q3ULM6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC35.14■■■■□ 3.22
Uspl1Q3ULM6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC35.11■■■■□ 3.21
Uspl1Q3ULM6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC35.07■■■■□ 3.2
Uspl1Q3ULM6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC35.02■■■■□ 3.2
Uspl1Q3ULM6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC35■■■■□ 3.19
Uspl1Q3ULM6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Uspl1Q3ULM6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Uspl1Q3ULM6 Mipep-204ENSMUST00000225043 1548 ntBASIC34.91■■■■□ 3.18
Uspl1Q3ULM6 AC166822.3-201ENSMUST00000227394 661 ntBASIC34.91■■■■□ 3.18
Uspl1Q3ULM6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC34.9■■■■□ 3.18
Uspl1Q3ULM6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC34.88■■■■□ 3.17
Uspl1Q3ULM6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC34.86■■■■□ 3.17
Uspl1Q3ULM6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Uspl1Q3ULM6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
Uspl1Q3ULM6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
Uspl1Q3ULM6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC34.83■■■■□ 3.17
Uspl1Q3ULM6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
Uspl1Q3ULM6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Uspl1Q3ULM6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
Uspl1Q3ULM6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC34.69■■■■□ 3.14
Uspl1Q3ULM6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Uspl1Q3ULM6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC34.66■■■■□ 3.14
Uspl1Q3ULM6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC34.64■■■■□ 3.14
Uspl1Q3ULM6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC34.63■■■■□ 3.13
Uspl1Q3ULM6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Uspl1Q3ULM6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms