Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SgcaP82350 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.65■■□□□ 1.22
SgcaP82350 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SgcaP82350 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SgcaP82350 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SgcaP82350 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.61■■□□□ 1.21
SgcaP82350 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SgcaP82350 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
SgcaP82350 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SgcaP82350 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SgcaP82350 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SgcaP82350 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SgcaP82350 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SgcaP82350 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SgcaP82350 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SgcaP82350 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
SgcaP82350 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.37■■□□□ 1.17
SgcaP82350 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SgcaP82350 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SgcaP82350 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.29■■□□□ 1.16
SgcaP82350 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SgcaP82350 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SgcaP82350 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SgcaP82350 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SgcaP82350 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SgcaP82350 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
SgcaP82350 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SgcaP82350 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
SgcaP82350 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.12■■□□□ 1.13
SgcaP82350 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.11■■□□□ 1.13
SgcaP82350 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
SgcaP82350 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
SgcaP82350 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.05■■□□□ 1.12
SgcaP82350 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
SgcaP82350 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SgcaP82350 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SgcaP82350 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.02■■□□□ 1.12
SgcaP82350 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SgcaP82350 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SgcaP82350 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SgcaP82350 Gm27325-201ENSMUST00000175467 74 ntBASIC22.01■■□□□ 1.11
SgcaP82350 Zxda-201ENSMUST00000117281 2621 ntBASIC21.97■■□□□ 1.11
SgcaP82350 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SgcaP82350 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SgcaP82350 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SgcaP82350 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SgcaP82350 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SgcaP82350 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SgcaP82350 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SgcaP82350 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SgcaP82350 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SgcaP82350 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SgcaP82350 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.83■■□□□ 1.09
SgcaP82350 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SgcaP82350 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SgcaP82350 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SgcaP82350 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SgcaP82350 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SgcaP82350 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SgcaP82350 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SgcaP82350 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SgcaP82350 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SgcaP82350 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SgcaP82350 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SgcaP82350 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SgcaP82350 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.76■■□□□ 1.07
SgcaP82350 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SgcaP82350 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SgcaP82350 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.74■■□□□ 1.07
SgcaP82350 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SgcaP82350 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SgcaP82350 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SgcaP82350 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SgcaP82350 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SgcaP82350 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SgcaP82350 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SgcaP82350 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SgcaP82350 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SgcaP82350 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.63■■□□□ 1.05
SgcaP82350 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SgcaP82350 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SgcaP82350 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SgcaP82350 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.61■■□□□ 1.05
SgcaP82350 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.6■■□□□ 1.05
SgcaP82350 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SgcaP82350 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SgcaP82350 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SgcaP82350 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SgcaP82350 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SgcaP82350 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SgcaP82350 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SgcaP82350 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SgcaP82350 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.55■■□□□ 1.04
SgcaP82350 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SgcaP82350 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SgcaP82350 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SgcaP82350 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.52■■□□□ 1.04
SgcaP82350 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SgcaP82350 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SgcaP82350 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms