Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
Sec61a1P61620 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Sec61a1P61620 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sec61a1P61620 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
Sec61a1P61620 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.72■■□□□ 1.39
Sec61a1P61620 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sec61a1P61620 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sec61a1P61620 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sec61a1P61620 Gm25262-201ENSMUST00000174934 133 ntBASIC23.68■■□□□ 1.38
Sec61a1P61620 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sec61a1P61620 Rab21-202ENSMUST00000218831 843 ntBASIC23.67■■□□□ 1.38
Sec61a1P61620 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.66■■□□□ 1.38
Sec61a1P61620 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Sec61a1P61620 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Sec61a1P61620 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.61■■□□□ 1.37
Sec61a1P61620 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Sec61a1P61620 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.58■■□□□ 1.37
Sec61a1P61620 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sec61a1P61620 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sec61a1P61620 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.52■■□□□ 1.36
Sec61a1P61620 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sec61a1P61620 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Sec61a1P61620 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Sec61a1P61620 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Sec61a1P61620 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.41■■□□□ 1.34
Sec61a1P61620 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Sec61a1P61620 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sec61a1P61620 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sec61a1P61620 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sec61a1P61620 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Sec61a1P61620 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Sec61a1P61620 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sec61a1P61620 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sec61a1P61620 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Sec61a1P61620 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sec61a1P61620 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sec61a1P61620 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Sec61a1P61620 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.26■■□□□ 1.31
Sec61a1P61620 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.25■■□□□ 1.31
Sec61a1P61620 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sec61a1P61620 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sec61a1P61620 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.22■■□□□ 1.31
Sec61a1P61620 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sec61a1P61620 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sec61a1P61620 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sec61a1P61620 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Sec61a1P61620 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Sec61a1P61620 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sec61a1P61620 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sec61a1P61620 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sec61a1P61620 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Sec61a1P61620 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.07■■□□□ 1.28
Sec61a1P61620 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.07■■□□□ 1.28
Sec61a1P61620 Gm26115-201ENSMUST00000175605 87 ntBASIC23.05■■□□□ 1.28
Sec61a1P61620 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sec61a1P61620 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
Sec61a1P61620 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sec61a1P61620 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.01■■□□□ 1.27
Sec61a1P61620 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Sec61a1P61620 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Sec61a1P61620 Gm8109-201ENSMUST00000194076 746 ntBASIC22.99■■□□□ 1.27
Sec61a1P61620 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.99■■□□□ 1.27
Sec61a1P61620 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sec61a1P61620 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22.98■■□□□ 1.27
Sec61a1P61620 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Sec61a1P61620 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Sec61a1P61620 Zxda-201ENSMUST00000117281 2621 ntBASIC22.9■■□□□ 1.26
Sec61a1P61620 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Sec61a1P61620 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sec61a1P61620 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Sec61a1P61620 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sec61a1P61620 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.79■■□□□ 1.24
Sec61a1P61620 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Sec61a1P61620 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.78■■□□□ 1.24
Sec61a1P61620 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sec61a1P61620 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sec61a1P61620 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sec61a1P61620 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sec61a1P61620 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sec61a1P61620 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sec61a1P61620 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Sec61a1P61620 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.72■■□□□ 1.23
Sec61a1P61620 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sec61a1P61620 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sec61a1P61620 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22.66■■□□□ 1.22
Sec61a1P61620 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Sec61a1P61620 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sec61a1P61620 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
Sec61a1P61620 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Sec61a1P61620 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sec61a1P61620 Gm27322-201ENSMUST00000184007 104 ntBASIC22.62■■□□□ 1.21
Sec61a1P61620 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sec61a1P61620 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.6■■□□□ 1.21
Sec61a1P61620 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Sec61a1P61620 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sec61a1P61620 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Sec61a1P61620 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Sec61a1P61620 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sec61a1P61620 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sec61a1P61620 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms