Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cks1bP61025 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cks1bP61025 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cks1bP61025 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cks1bP61025 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cks1bP61025 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cks1bP61025 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cks1bP61025 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cks1bP61025 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cks1bP61025 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cks1bP61025 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cks1bP61025 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cks1bP61025 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cks1bP61025 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cks1bP61025 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cks1bP61025 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cks1bP61025 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cks1bP61025 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cks1bP61025 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Cks1bP61025 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cks1bP61025 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cks1bP61025 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cks1bP61025 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cks1bP61025 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Cks1bP61025 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cks1bP61025 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cks1bP61025 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cks1bP61025 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cks1bP61025 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Cks1bP61025 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cks1bP61025 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cks1bP61025 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cks1bP61025 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cks1bP61025 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cks1bP61025 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cks1bP61025 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cks1bP61025 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.57■□□□□ 0.56
Cks1bP61025 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cks1bP61025 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cks1bP61025 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cks1bP61025 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.53■□□□□ 0.56
Cks1bP61025 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cks1bP61025 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cks1bP61025 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cks1bP61025 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cks1bP61025 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cks1bP61025 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cks1bP61025 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cks1bP61025 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cks1bP61025 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cks1bP61025 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cks1bP61025 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cks1bP61025 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cks1bP61025 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cks1bP61025 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cks1bP61025 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cks1bP61025 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cks1bP61025 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cks1bP61025 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cks1bP61025 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cks1bP61025 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cks1bP61025 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cks1bP61025 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cks1bP61025 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cks1bP61025 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cks1bP61025 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cks1bP61025 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cks1bP61025 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cks1bP61025 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cks1bP61025 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cks1bP61025 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cks1bP61025 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cks1bP61025 Gm27325-201ENSMUST00000175467 74 ntBASIC18.32■□□□□ 0.52
Cks1bP61025 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cks1bP61025 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cks1bP61025 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cks1bP61025 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cks1bP61025 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cks1bP61025 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.26■□□□□ 0.51
Cks1bP61025 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cks1bP61025 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cks1bP61025 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cks1bP61025 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cks1bP61025 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cks1bP61025 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cks1bP61025 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.19■□□□□ 0.5
Cks1bP61025 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cks1bP61025 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cks1bP61025 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cks1bP61025 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cks1bP61025 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cks1bP61025 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cks1bP61025 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cks1bP61025 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cks1bP61025 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC18.14■□□□□ 0.49
Cks1bP61025 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cks1bP61025 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cks1bP61025 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cks1bP61025 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cks1bP61025 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms