Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccl1P10146 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.1■□□□□ 0.97
Ccl1P10146 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccl1P10146 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccl1P10146 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccl1P10146 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Ccl1P10146 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccl1P10146 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccl1P10146 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ccl1P10146 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ccl1P10146 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccl1P10146 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccl1P10146 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccl1P10146 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccl1P10146 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccl1P10146 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccl1P10146 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccl1P10146 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Ccl1P10146 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.77■□□□□ 0.92
Ccl1P10146 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ccl1P10146 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ccl1P10146 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.71■□□□□ 0.91
Ccl1P10146 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccl1P10146 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccl1P10146 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ccl1P10146 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.67■□□□□ 0.9
Ccl1P10146 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ccl1P10146 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccl1P10146 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccl1P10146 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Ccl1P10146 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccl1P10146 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.61■□□□□ 0.89
Ccl1P10146 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccl1P10146 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.58■□□□□ 0.89
Ccl1P10146 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccl1P10146 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ccl1P10146 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccl1P10146 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccl1P10146 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccl1P10146 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccl1P10146 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccl1P10146 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccl1P10146 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ccl1P10146 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccl1P10146 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccl1P10146 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccl1P10146 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccl1P10146 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccl1P10146 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.39■□□□□ 0.86
Ccl1P10146 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccl1P10146 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccl1P10146 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccl1P10146 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccl1P10146 Zxda-201ENSMUST00000117281 2621 ntBASIC20.37■□□□□ 0.85
Ccl1P10146 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ccl1P10146 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccl1P10146 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccl1P10146 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccl1P10146 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccl1P10146 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccl1P10146 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccl1P10146 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.3■□□□□ 0.84
Ccl1P10146 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccl1P10146 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccl1P10146 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Ccl1P10146 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccl1P10146 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccl1P10146 Gm27325-201ENSMUST00000175467 74 ntBASIC20.25■□□□□ 0.83
Ccl1P10146 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Ccl1P10146 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.24■□□□□ 0.83
Ccl1P10146 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccl1P10146 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccl1P10146 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccl1P10146 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccl1P10146 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccl1P10146 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccl1P10146 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.18■□□□□ 0.82
Ccl1P10146 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccl1P10146 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccl1P10146 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.15■□□□□ 0.82
Ccl1P10146 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccl1P10146 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccl1P10146 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccl1P10146 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccl1P10146 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccl1P10146 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.1■□□□□ 0.81
Ccl1P10146 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccl1P10146 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccl1P10146 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccl1P10146 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccl1P10146 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccl1P10146 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccl1P10146 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccl1P10146 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccl1P10146 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccl1P10146 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccl1P10146 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccl1P10146 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccl1P10146 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccl1P10146 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms