Protein–RNA interactions for Protein: O88676

Mmp23, Matrix metalloproteinase-23, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp23O88676 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp23O88676 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp23O88676 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp23O88676 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp23O88676 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp23O88676 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp23O88676 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp23O88676 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Mmp23O88676 Gm24109-201ENSMUST00000175489 103 ntBASIC20.45■□□□□ 0.86
Mmp23O88676 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Mmp23O88676 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mmp23O88676 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp23O88676 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp23O88676 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp23O88676 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp23O88676 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mmp23O88676 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Mmp23O88676 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp23O88676 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp23O88676 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp23O88676 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp23O88676 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp23O88676 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp23O88676 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp23O88676 Gm23366-201ENSMUST00000175022 89 ntBASIC20.2■□□□□ 0.82
Mmp23O88676 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp23O88676 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp23O88676 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp23O88676 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Mmp23O88676 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Mmp23O88676 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.14■□□□□ 0.81
Mmp23O88676 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.13■□□□□ 0.81
Mmp23O88676 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Mmp23O88676 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp23O88676 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp23O88676 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp23O88676 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp23O88676 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp23O88676 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.06■□□□□ 0.8
Mmp23O88676 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.05■□□□□ 0.8
Mmp23O88676 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp23O88676 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mmp23O88676 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp23O88676 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Mmp23O88676 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Mmp23O88676 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mmp23O88676 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp23O88676 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp23O88676 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Mmp23O88676 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mmp23O88676 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mmp23O88676 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mmp23O88676 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.92■□□□□ 0.78
Mmp23O88676 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp23O88676 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp23O88676 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp23O88676 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp23O88676 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.87■□□□□ 0.77
Mmp23O88676 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.84■□□□□ 0.77
Mmp23O88676 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Mmp23O88676 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Mmp23O88676 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
Mmp23O88676 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Mmp23O88676 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp23O88676 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Mmp23O88676 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Mmp23O88676 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Mmp23O88676 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp23O88676 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp23O88676 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mmp23O88676 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Mmp23O88676 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Mmp23O88676 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Mmp23O88676 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.75■□□□□ 0.75
Mmp23O88676 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp23O88676 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp23O88676 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mmp23O88676 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.73■□□□□ 0.75
Mmp23O88676 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Mmp23O88676 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp23O88676 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Mmp23O88676 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
Mmp23O88676 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.64■□□□□ 0.73
Mmp23O88676 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp23O88676 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp23O88676 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp23O88676 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp23O88676 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp23O88676 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.62■□□□□ 0.73
Mmp23O88676 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp23O88676 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Mmp23O88676 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp23O88676 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp23O88676 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Mmp23O88676 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp23O88676 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp23O88676 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Mmp23O88676 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp23O88676 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp23O88676 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms