Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pde6dO55057 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pde6dO55057 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pde6dO55057 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Pde6dO55057 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pde6dO55057 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pde6dO55057 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Pde6dO55057 Gm24109-201ENSMUST00000175489 103 ntBASIC21.34■■□□□ 1.01
Pde6dO55057 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pde6dO55057 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pde6dO55057 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.26■□□□□ 0.99
Pde6dO55057 Gm23366-201ENSMUST00000175022 89 ntBASIC21.24■□□□□ 0.99
Pde6dO55057 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pde6dO55057 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pde6dO55057 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Pde6dO55057 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.22■□□□□ 0.99
Pde6dO55057 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Pde6dO55057 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pde6dO55057 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pde6dO55057 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6dO55057 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pde6dO55057 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Pde6dO55057 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Pde6dO55057 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.12■□□□□ 0.97
Pde6dO55057 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Pde6dO55057 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pde6dO55057 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pde6dO55057 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pde6dO55057 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.04■□□□□ 0.96
Pde6dO55057 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pde6dO55057 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6dO55057 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.99■□□□□ 0.95
Pde6dO55057 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.99■□□□□ 0.95
Pde6dO55057 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6dO55057 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pde6dO55057 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pde6dO55057 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6dO55057 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pde6dO55057 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pde6dO55057 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pde6dO55057 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pde6dO55057 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.9■□□□□ 0.94
Pde6dO55057 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pde6dO55057 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6dO55057 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pde6dO55057 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.87■□□□□ 0.93
Pde6dO55057 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pde6dO55057 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pde6dO55057 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6dO55057 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6dO55057 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pde6dO55057 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pde6dO55057 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pde6dO55057 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pde6dO55057 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pde6dO55057 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.78■□□□□ 0.92
Pde6dO55057 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.78■□□□□ 0.92
Pde6dO55057 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pde6dO55057 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pde6dO55057 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pde6dO55057 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pde6dO55057 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pde6dO55057 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Pde6dO55057 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pde6dO55057 Zxda-201ENSMUST00000117281 2621 ntBASIC20.72■□□□□ 0.91
Pde6dO55057 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pde6dO55057 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pde6dO55057 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Pde6dO55057 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pde6dO55057 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pde6dO55057 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pde6dO55057 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Pde6dO55057 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pde6dO55057 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6dO55057 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6dO55057 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pde6dO55057 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pde6dO55057 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pde6dO55057 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pde6dO55057 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pde6dO55057 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pde6dO55057 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pde6dO55057 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.58■□□□□ 0.88
Pde6dO55057 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pde6dO55057 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pde6dO55057 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pde6dO55057 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.56■□□□□ 0.88
Pde6dO55057 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pde6dO55057 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pde6dO55057 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pde6dO55057 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.52■□□□□ 0.88
Pde6dO55057 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pde6dO55057 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pde6dO55057 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pde6dO55057 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pde6dO55057 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pde6dO55057 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pde6dO55057 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pde6dO55057 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pde6dO55057 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms