Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ndufb11O09111 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ndufb11O09111 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ndufb11O09111 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ndufb11O09111 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ndufb11O09111 Gm15045-201ENSMUST00000117359 883 ntBASIC21.94■■□□□ 1.1
Ndufb11O09111 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ndufb11O09111 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ndufb11O09111 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ndufb11O09111 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ndufb11O09111 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Ndufb11O09111 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ndufb11O09111 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ndufb11O09111 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ndufb11O09111 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.77■■□□□ 1.08
Ndufb11O09111 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ndufb11O09111 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ndufb11O09111 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ndufb11O09111 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ndufb11O09111 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.68■■□□□ 1.06
Ndufb11O09111 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Ndufb11O09111 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ndufb11O09111 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ndufb11O09111 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ndufb11O09111 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ndufb11O09111 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ndufb11O09111 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ndufb11O09111 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.59■■□□□ 1.05
Ndufb11O09111 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ndufb11O09111 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ndufb11O09111 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ndufb11O09111 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ndufb11O09111 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ndufb11O09111 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ndufb11O09111 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ndufb11O09111 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ndufb11O09111 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ndufb11O09111 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.48■■□□□ 1.03
Ndufb11O09111 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ndufb11O09111 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ndufb11O09111 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Ndufb11O09111 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ndufb11O09111 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ndufb11O09111 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ndufb11O09111 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.41■■□□□ 1.02
Ndufb11O09111 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ndufb11O09111 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ndufb11O09111 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ndufb11O09111 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ndufb11O09111 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ndufb11O09111 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ndufb11O09111 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.34■■□□□ 1.01
Ndufb11O09111 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.34■■□□□ 1.01
Ndufb11O09111 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ndufb11O09111 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ndufb11O09111 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Ndufb11O09111 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ndufb11O09111 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ndufb11O09111 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Ndufb11O09111 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ndufb11O09111 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ndufb11O09111 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ndufb11O09111 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ndufb11O09111 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Ndufb11O09111 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ndufb11O09111 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ndufb11O09111 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
Ndufb11O09111 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ndufb11O09111 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ndufb11O09111 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ndufb11O09111 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ndufb11O09111 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ndufb11O09111 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ndufb11O09111 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ndufb11O09111 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ndufb11O09111 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ndufb11O09111 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ndufb11O09111 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ndufb11O09111 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ndufb11O09111 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ndufb11O09111 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ndufb11O09111 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ndufb11O09111 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ndufb11O09111 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ndufb11O09111 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ndufb11O09111 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ndufb11O09111 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ndufb11O09111 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ndufb11O09111 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.08■□□□□ 0.96
Ndufb11O09111 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ndufb11O09111 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ndufb11O09111 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Ndufb11O09111 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ndufb11O09111 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ndufb11O09111 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ndufb11O09111 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ndufb11O09111 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ndufb11O09111 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ndufb11O09111 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ndufb11O09111 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms