Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trav13n-4A0A0G2JG01 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trav13n-4A0A0G2JG01 Gm8109-201ENSMUST00000194076 746 ntBASIC22.08■■□□□ 1.13
Trav13n-4A0A0G2JG01 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Trav13n-4A0A0G2JG01 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trav13n-4A0A0G2JG01 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
Trav13n-4A0A0G2JG01 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trav13n-4A0A0G2JG01 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22■■□□□ 1.11
Trav13n-4A0A0G2JG01 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trav13n-4A0A0G2JG01 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Trav13n-4A0A0G2JG01 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trav13n-4A0A0G2JG01 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Trav13n-4A0A0G2JG01 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trav13n-4A0A0G2JG01 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trav13n-4A0A0G2JG01 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trav13n-4A0A0G2JG01 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.89■■□□□ 1.09
Trav13n-4A0A0G2JG01 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.88■■□□□ 1.09
Trav13n-4A0A0G2JG01 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trav13n-4A0A0G2JG01 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trav13n-4A0A0G2JG01 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trav13n-4A0A0G2JG01 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trav13n-4A0A0G2JG01 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trav13n-4A0A0G2JG01 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trav13n-4A0A0G2JG01 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trav13n-4A0A0G2JG01 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trav13n-4A0A0G2JG01 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trav13n-4A0A0G2JG01 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trav13n-4A0A0G2JG01 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Trav13n-4A0A0G2JG01 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trav13n-4A0A0G2JG01 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trav13n-4A0A0G2JG01 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trav13n-4A0A0G2JG01 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.64■■□□□ 1.05
Trav13n-4A0A0G2JG01 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav13n-4A0A0G2JG01 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Trav13n-4A0A0G2JG01 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trav13n-4A0A0G2JG01 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav13n-4A0A0G2JG01 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.59■■□□□ 1.05
Trav13n-4A0A0G2JG01 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Trav13n-4A0A0G2JG01 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.57■■□□□ 1.04
Trav13n-4A0A0G2JG01 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.55■■□□□ 1.04
Trav13n-4A0A0G2JG01 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trav13n-4A0A0G2JG01 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Trav13n-4A0A0G2JG01 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Trav13n-4A0A0G2JG01 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trav13n-4A0A0G2JG01 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.51■■□□□ 1.03
Trav13n-4A0A0G2JG01 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Trav13n-4A0A0G2JG01 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trav13n-4A0A0G2JG01 Gm27322-201ENSMUST00000184007 104 ntBASIC21.45■■□□□ 1.02
Trav13n-4A0A0G2JG01 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trav13n-4A0A0G2JG01 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav13n-4A0A0G2JG01 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav13n-4A0A0G2JG01 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Trav13n-4A0A0G2JG01 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.42■■□□□ 1.02
Trav13n-4A0A0G2JG01 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Trav13n-4A0A0G2JG01 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trav13n-4A0A0G2JG01 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.39■■□□□ 1.01
Trav13n-4A0A0G2JG01 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Trav13n-4A0A0G2JG01 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trav13n-4A0A0G2JG01 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Trav13n-4A0A0G2JG01 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.32■■□□□ 1
Trav13n-4A0A0G2JG01 Gm24804-201ENSMUST00000174982 85 ntBASIC21.3■■□□□ 1
Trav13n-4A0A0G2JG01 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trav13n-4A0A0G2JG01 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Trav13n-4A0A0G2JG01 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav13n-4A0A0G2JG01 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trav13n-4A0A0G2JG01 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav13n-4A0A0G2JG01 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav13n-4A0A0G2JG01 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Trav13n-4A0A0G2JG01 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.24■□□□□ 0.99
Trav13n-4A0A0G2JG01 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav13n-4A0A0G2JG01 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.21■□□□□ 0.99
Trav13n-4A0A0G2JG01 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trav13n-4A0A0G2JG01 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav13n-4A0A0G2JG01 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trav13n-4A0A0G2JG01 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trav13n-4A0A0G2JG01 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav13n-4A0A0G2JG01 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trav13n-4A0A0G2JG01 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Trav13n-4A0A0G2JG01 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.11■□□□□ 0.97
Trav13n-4A0A0G2JG01 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.1■□□□□ 0.97
Trav13n-4A0A0G2JG01 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trav13n-4A0A0G2JG01 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trav13n-4A0A0G2JG01 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav13n-4A0A0G2JG01 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.03■□□□□ 0.96
Trav13n-4A0A0G2JG01 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.02■□□□□ 0.96
Trav13n-4A0A0G2JG01 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav13n-4A0A0G2JG01 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trav13n-4A0A0G2JG01 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav13n-4A0A0G2JG01 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trav13n-4A0A0G2JG01 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav13n-4A0A0G2JG01 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Trav13n-4A0A0G2JG01 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav13n-4A0A0G2JG01 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trav13n-4A0A0G2JG01 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav13n-4A0A0G2JG01 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav13n-4A0A0G2JG01 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trav13n-4A0A0G2JG01 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Trav13n-4A0A0G2JG01 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.9■□□□□ 0.94
Trav13n-4A0A0G2JG01 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trav13n-4A0A0G2JG01 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms