Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Igkv8-27A0A0G2JF28 Zxda-201ENSMUST00000117281 2621 ntBASIC17.06■□□□□ 0.32
Igkv8-27A0A0G2JF28 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Igkv8-27A0A0G2JF28 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv8-27A0A0G2JF28 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv8-27A0A0G2JF28 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Igkv8-27A0A0G2JF28 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Igkv8-27A0A0G2JF28 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Igkv8-27A0A0G2JF28 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Igkv8-27A0A0G2JF28 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Igkv8-27A0A0G2JF28 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Igkv8-27A0A0G2JF28 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Igkv8-27A0A0G2JF28 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv8-27A0A0G2JF28 Gm2415-204ENSMUST00000190235 2004 ntBASIC16.87■□□□□ 0.29
Igkv8-27A0A0G2JF28 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv8-27A0A0G2JF28 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Igkv8-27A0A0G2JF28 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv8-27A0A0G2JF28 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv8-27A0A0G2JF28 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv8-27A0A0G2JF28 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv8-27A0A0G2JF28 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC16.8■□□□□ 0.28
Igkv8-27A0A0G2JF28 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv8-27A0A0G2JF28 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Igkv8-27A0A0G2JF28 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv8-27A0A0G2JF28 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv8-27A0A0G2JF28 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Igkv8-27A0A0G2JF28 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Igkv8-27A0A0G2JF28 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv8-27A0A0G2JF28 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv8-27A0A0G2JF28 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv8-27A0A0G2JF28 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Igkv8-27A0A0G2JF28 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv8-27A0A0G2JF28 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv8-27A0A0G2JF28 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igkv8-27A0A0G2JF28 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv8-27A0A0G2JF28 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv8-27A0A0G2JF28 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv8-27A0A0G2JF28 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv8-27A0A0G2JF28 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv8-27A0A0G2JF28 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv8-27A0A0G2JF28 Gm9905-201ENSMUST00000065740 1845 ntBASIC16.67■□□□□ 0.26
Igkv8-27A0A0G2JF28 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv8-27A0A0G2JF28 Gm6658-202ENSMUST00000209493 1885 ntBASIC16.65■□□□□ 0.26
Igkv8-27A0A0G2JF28 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC16.63■□□□□ 0.25
Igkv8-27A0A0G2JF28 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv8-27A0A0G2JF28 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv8-27A0A0G2JF28 Gm6206-201ENSMUST00000133472 2199 ntBASIC16.62■□□□□ 0.25
Igkv8-27A0A0G2JF28 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv8-27A0A0G2JF28 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv8-27A0A0G2JF28 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Igkv8-27A0A0G2JF28 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv8-27A0A0G2JF28 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC16.59■□□□□ 0.25
Igkv8-27A0A0G2JF28 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv8-27A0A0G2JF28 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv8-27A0A0G2JF28 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv8-27A0A0G2JF28 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv8-27A0A0G2JF28 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv8-27A0A0G2JF28 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC16.56■□□□□ 0.24
Igkv8-27A0A0G2JF28 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv8-27A0A0G2JF28 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv8-27A0A0G2JF28 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Igkv8-27A0A0G2JF28 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Igkv8-27A0A0G2JF28 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv8-27A0A0G2JF28 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv8-27A0A0G2JF28 Gm24109-201ENSMUST00000175489 103 ntBASIC16.53■□□□□ 0.24
Igkv8-27A0A0G2JF28 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv8-27A0A0G2JF28 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv8-27A0A0G2JF28 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv8-27A0A0G2JF28 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv8-27A0A0G2JF28 AC153911.1-202ENSMUST00000218534 1034 ntBASIC16.5■□□□□ 0.23
Igkv8-27A0A0G2JF28 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv8-27A0A0G2JF28 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv8-27A0A0G2JF28 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv8-27A0A0G2JF28 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv8-27A0A0G2JF28 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv8-27A0A0G2JF28 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv8-27A0A0G2JF28 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv8-27A0A0G2JF28 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv8-27A0A0G2JF28 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv8-27A0A0G2JF28 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Igkv8-27A0A0G2JF28 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv8-27A0A0G2JF28 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv8-27A0A0G2JF28 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv8-27A0A0G2JF28 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
Igkv8-27A0A0G2JF28 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv8-27A0A0G2JF28 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv8-27A0A0G2JF28 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Igkv8-27A0A0G2JF28 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Igkv8-27A0A0G2JF28 Gm23366-201ENSMUST00000175022 89 ntBASIC16.39■□□□□ 0.21
Igkv8-27A0A0G2JF28 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv8-27A0A0G2JF28 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv8-27A0A0G2JF28 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv8-27A0A0G2JF28 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv8-27A0A0G2JF28 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Igkv8-27A0A0G2JF28 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv8-27A0A0G2JF28 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv8-27A0A0G2JF28 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv8-27A0A0G2JF28 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv8-27A0A0G2JF28 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv8-27A0A0G2JF28 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms