Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv8-28A0A0G2JE47 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Igkv8-28A0A0G2JE47 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Igkv8-28A0A0G2JE47 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Igkv8-28A0A0G2JE47 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Igkv8-28A0A0G2JE47 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Igkv8-28A0A0G2JE47 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Igkv8-28A0A0G2JE47 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Igkv8-28A0A0G2JE47 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv8-28A0A0G2JE47 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv8-28A0A0G2JE47 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv8-28A0A0G2JE47 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Igkv8-28A0A0G2JE47 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv8-28A0A0G2JE47 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv8-28A0A0G2JE47 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC16.79■□□□□ 0.28
Igkv8-28A0A0G2JE47 AC153504.1-201ENSMUST00000218379 2290 ntBASIC16.79■□□□□ 0.28
Igkv8-28A0A0G2JE47 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Igkv8-28A0A0G2JE47 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv8-28A0A0G2JE47 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv8-28A0A0G2JE47 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Igkv8-28A0A0G2JE47 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Igkv8-28A0A0G2JE47 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Igkv8-28A0A0G2JE47 AC153911.1-202ENSMUST00000218534 1034 ntBASIC16.65■□□□□ 0.26
Igkv8-28A0A0G2JE47 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv8-28A0A0G2JE47 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv8-28A0A0G2JE47 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv8-28A0A0G2JE47 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv8-28A0A0G2JE47 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv8-28A0A0G2JE47 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv8-28A0A0G2JE47 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv8-28A0A0G2JE47 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv8-28A0A0G2JE47 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Igkv8-28A0A0G2JE47 Zxda-201ENSMUST00000117281 2621 ntBASIC16.59■□□□□ 0.25
Igkv8-28A0A0G2JE47 Gm2415-204ENSMUST00000190235 2004 ntBASIC16.59■□□□□ 0.25
Igkv8-28A0A0G2JE47 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Igkv8-28A0A0G2JE47 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv8-28A0A0G2JE47 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Igkv8-28A0A0G2JE47 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Igkv8-28A0A0G2JE47 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Igkv8-28A0A0G2JE47 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Igkv8-28A0A0G2JE47 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv8-28A0A0G2JE47 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv8-28A0A0G2JE47 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv8-28A0A0G2JE47 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv8-28A0A0G2JE47 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv8-28A0A0G2JE47 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv8-28A0A0G2JE47 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv8-28A0A0G2JE47 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv8-28A0A0G2JE47 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv8-28A0A0G2JE47 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC16.42■□□□□ 0.22
Igkv8-28A0A0G2JE47 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC16.42■□□□□ 0.22
Igkv8-28A0A0G2JE47 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC16.42■□□□□ 0.22
Igkv8-28A0A0G2JE47 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv8-28A0A0G2JE47 Gm6658-202ENSMUST00000209493 1885 ntBASIC16.38■□□□□ 0.21
Igkv8-28A0A0G2JE47 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv8-28A0A0G2JE47 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv8-28A0A0G2JE47 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv8-28A0A0G2JE47 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv8-28A0A0G2JE47 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv8-28A0A0G2JE47 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv8-28A0A0G2JE47 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv8-28A0A0G2JE47 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv8-28A0A0G2JE47 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv8-28A0A0G2JE47 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv8-28A0A0G2JE47 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC16.33■□□□□ 0.2
Igkv8-28A0A0G2JE47 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv8-28A0A0G2JE47 Gm9905-201ENSMUST00000065740 1845 ntBASIC16.31■□□□□ 0.2
Igkv8-28A0A0G2JE47 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv8-28A0A0G2JE47 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv8-28A0A0G2JE47 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv8-28A0A0G2JE47 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv8-28A0A0G2JE47 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv8-28A0A0G2JE47 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv8-28A0A0G2JE47 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv8-28A0A0G2JE47 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv8-28A0A0G2JE47 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv8-28A0A0G2JE47 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv8-28A0A0G2JE47 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Igkv8-28A0A0G2JE47 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Igkv8-28A0A0G2JE47 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Igkv8-28A0A0G2JE47 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC16.27■□□□□ 0.19
Igkv8-28A0A0G2JE47 Gm6206-201ENSMUST00000133472 2199 ntBASIC16.27■□□□□ 0.19
Igkv8-28A0A0G2JE47 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igkv8-28A0A0G2JE47 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Igkv8-28A0A0G2JE47 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Igkv8-28A0A0G2JE47 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv8-28A0A0G2JE47 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv8-28A0A0G2JE47 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv8-28A0A0G2JE47 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv8-28A0A0G2JE47 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv8-28A0A0G2JE47 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv8-28A0A0G2JE47 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv8-28A0A0G2JE47 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Igkv8-28A0A0G2JE47 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv8-28A0A0G2JE47 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Igkv8-28A0A0G2JE47 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv8-28A0A0G2JE47 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv8-28A0A0G2JE47 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv8-28A0A0G2JE47 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv8-28A0A0G2JE47 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms