Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.02
Trbv13-3A0A0B4J1H2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trbv13-3A0A0B4J1H2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trbv13-3A0A0B4J1H2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trbv13-3A0A0B4J1H2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Trbv13-3A0A0B4J1H2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.35■■□□□ 1.01
Trbv13-3A0A0B4J1H2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trbv13-3A0A0B4J1H2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trbv13-3A0A0B4J1H2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trbv13-3A0A0B4J1H2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trbv13-3A0A0B4J1H2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trbv13-3A0A0B4J1H2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Trbv13-3A0A0B4J1H2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trbv13-3A0A0B4J1H2 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.19■□□□□ 0.98
Trbv13-3A0A0B4J1H2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trbv13-3A0A0B4J1H2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trbv13-3A0A0B4J1H2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trbv13-3A0A0B4J1H2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trbv13-3A0A0B4J1H2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.14■□□□□ 0.97
Trbv13-3A0A0B4J1H2 Gm23366-201ENSMUST00000175022 89 ntBASIC21.13■□□□□ 0.97
Trbv13-3A0A0B4J1H2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.07■□□□□ 0.96
Trbv13-3A0A0B4J1H2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trbv13-3A0A0B4J1H2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Trbv13-3A0A0B4J1H2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trbv13-3A0A0B4J1H2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trbv13-3A0A0B4J1H2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.01■□□□□ 0.95
Trbv13-3A0A0B4J1H2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trbv13-3A0A0B4J1H2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Trbv13-3A0A0B4J1H2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Trbv13-3A0A0B4J1H2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trbv13-3A0A0B4J1H2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trbv13-3A0A0B4J1H2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trbv13-3A0A0B4J1H2 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.98■□□□□ 0.95
Trbv13-3A0A0B4J1H2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trbv13-3A0A0B4J1H2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trbv13-3A0A0B4J1H2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trbv13-3A0A0B4J1H2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trbv13-3A0A0B4J1H2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.94■□□□□ 0.94
Trbv13-3A0A0B4J1H2 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.92■□□□□ 0.94
Trbv13-3A0A0B4J1H2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trbv13-3A0A0B4J1H2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Trbv13-3A0A0B4J1H2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trbv13-3A0A0B4J1H2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trbv13-3A0A0B4J1H2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Trbv13-3A0A0B4J1H2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trbv13-3A0A0B4J1H2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trbv13-3A0A0B4J1H2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trbv13-3A0A0B4J1H2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Trbv13-3A0A0B4J1H2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trbv13-3A0A0B4J1H2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trbv13-3A0A0B4J1H2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trbv13-3A0A0B4J1H2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.84■□□□□ 0.93
Trbv13-3A0A0B4J1H2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trbv13-3A0A0B4J1H2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trbv13-3A0A0B4J1H2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trbv13-3A0A0B4J1H2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trbv13-3A0A0B4J1H2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trbv13-3A0A0B4J1H2 Zxda-201ENSMUST00000117281 2621 ntBASIC20.79■□□□□ 0.92
Trbv13-3A0A0B4J1H2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trbv13-3A0A0B4J1H2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trbv13-3A0A0B4J1H2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trbv13-3A0A0B4J1H2 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.75■□□□□ 0.91
Trbv13-3A0A0B4J1H2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trbv13-3A0A0B4J1H2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trbv13-3A0A0B4J1H2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trbv13-3A0A0B4J1H2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trbv13-3A0A0B4J1H2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trbv13-3A0A0B4J1H2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trbv13-3A0A0B4J1H2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trbv13-3A0A0B4J1H2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trbv13-3A0A0B4J1H2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Trbv13-3A0A0B4J1H2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trbv13-3A0A0B4J1H2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.64■□□□□ 0.9
Trbv13-3A0A0B4J1H2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv13-3A0A0B4J1H2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv13-3A0A0B4J1H2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trbv13-3A0A0B4J1H2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trbv13-3A0A0B4J1H2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trbv13-3A0A0B4J1H2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trbv13-3A0A0B4J1H2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trbv13-3A0A0B4J1H2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trbv13-3A0A0B4J1H2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trbv13-3A0A0B4J1H2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trbv13-3A0A0B4J1H2 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.59■□□□□ 0.89
Trbv13-3A0A0B4J1H2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Trbv13-3A0A0B4J1H2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbv13-3A0A0B4J1H2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trbv13-3A0A0B4J1H2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trbv13-3A0A0B4J1H2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trbv13-3A0A0B4J1H2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.5■□□□□ 0.87
Trbv13-3A0A0B4J1H2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv13-3A0A0B4J1H2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbv13-3A0A0B4J1H2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbv13-3A0A0B4J1H2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv13-3A0A0B4J1H2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv13-3A0A0B4J1H2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trbv13-3A0A0B4J1H2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trbv13-3A0A0B4J1H2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv13-3A0A0B4J1H2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Trbv13-3A0A0B4J1H2 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms