Protein–RNA interactions for Protein: A0A0A6YX19

Ighv6-4, Immunoglobulin heavy variable V6-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-4A0A0A6YX19 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ighv6-4A0A0A6YX19 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ighv6-4A0A0A6YX19 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ighv6-4A0A0A6YX19 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ighv6-4A0A0A6YX19 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ighv6-4A0A0A6YX19 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ighv6-4A0A0A6YX19 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ighv6-4A0A0A6YX19 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ighv6-4A0A0A6YX19 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ighv6-4A0A0A6YX19 Gm23366-201ENSMUST00000175022 89 ntBASIC21.46■■□□□ 1.03
Ighv6-4A0A0A6YX19 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ighv6-4A0A0A6YX19 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ighv6-4A0A0A6YX19 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Ighv6-4A0A0A6YX19 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ighv6-4A0A0A6YX19 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ighv6-4A0A0A6YX19 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.36■■□□□ 1.01
Ighv6-4A0A0A6YX19 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ighv6-4A0A0A6YX19 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.29■■□□□ 1
Ighv6-4A0A0A6YX19 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ighv6-4A0A0A6YX19 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ighv6-4A0A0A6YX19 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ighv6-4A0A0A6YX19 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.27■■□□□ 1
Ighv6-4A0A0A6YX19 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ighv6-4A0A0A6YX19 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ighv6-4A0A0A6YX19 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ighv6-4A0A0A6YX19 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ighv6-4A0A0A6YX19 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ighv6-4A0A0A6YX19 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ighv6-4A0A0A6YX19 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv6-4A0A0A6YX19 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv6-4A0A0A6YX19 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv6-4A0A0A6YX19 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ighv6-4A0A0A6YX19 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ighv6-4A0A0A6YX19 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ighv6-4A0A0A6YX19 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Ighv6-4A0A0A6YX19 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ighv6-4A0A0A6YX19 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ighv6-4A0A0A6YX19 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ighv6-4A0A0A6YX19 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ighv6-4A0A0A6YX19 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Ighv6-4A0A0A6YX19 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ighv6-4A0A0A6YX19 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ighv6-4A0A0A6YX19 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ighv6-4A0A0A6YX19 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ighv6-4A0A0A6YX19 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv6-4A0A0A6YX19 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Ighv6-4A0A0A6YX19 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv6-4A0A0A6YX19 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv6-4A0A0A6YX19 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.04■□□□□ 0.96
Ighv6-4A0A0A6YX19 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv6-4A0A0A6YX19 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv6-4A0A0A6YX19 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.03■□□□□ 0.96
Ighv6-4A0A0A6YX19 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ighv6-4A0A0A6YX19 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ighv6-4A0A0A6YX19 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.98■□□□□ 0.95
Ighv6-4A0A0A6YX19 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.98■□□□□ 0.95
Ighv6-4A0A0A6YX19 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv6-4A0A0A6YX19 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv6-4A0A0A6YX19 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv6-4A0A0A6YX19 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv6-4A0A0A6YX19 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv6-4A0A0A6YX19 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.92■□□□□ 0.94
Ighv6-4A0A0A6YX19 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ighv6-4A0A0A6YX19 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv6-4A0A0A6YX19 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv6-4A0A0A6YX19 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv6-4A0A0A6YX19 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv6-4A0A0A6YX19 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv6-4A0A0A6YX19 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv6-4A0A0A6YX19 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.88■□□□□ 0.93
Ighv6-4A0A0A6YX19 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv6-4A0A0A6YX19 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ighv6-4A0A0A6YX19 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ighv6-4A0A0A6YX19 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ighv6-4A0A0A6YX19 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.84■□□□□ 0.93
Ighv6-4A0A0A6YX19 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
Ighv6-4A0A0A6YX19 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ighv6-4A0A0A6YX19 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv6-4A0A0A6YX19 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
Ighv6-4A0A0A6YX19 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ighv6-4A0A0A6YX19 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ighv6-4A0A0A6YX19 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ighv6-4A0A0A6YX19 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv6-4A0A0A6YX19 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ighv6-4A0A0A6YX19 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ighv6-4A0A0A6YX19 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ighv6-4A0A0A6YX19 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ighv6-4A0A0A6YX19 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ighv6-4A0A0A6YX19 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ighv6-4A0A0A6YX19 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ighv6-4A0A0A6YX19 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ighv6-4A0A0A6YX19 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ighv6-4A0A0A6YX19 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ighv6-4A0A0A6YX19 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ighv6-4A0A0A6YX19 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ighv6-4A0A0A6YX19 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Ighv6-4A0A0A6YX19 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ighv6-4A0A0A6YX19 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ighv6-4A0A0A6YX19 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ighv6-4A0A0A6YX19 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms