Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav13-4-dv7A0A075B6C2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trav13-4-dv7A0A075B6C2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav13-4-dv7A0A075B6C2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trav13-4-dv7A0A075B6C2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.59■□□□□ 0.57
Trav13-4-dv7A0A075B6C2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13-4-dv7A0A075B6C2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav13-4-dv7A0A075B6C2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC18.57■□□□□ 0.56
Trav13-4-dv7A0A075B6C2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.56■□□□□ 0.56
Trav13-4-dv7A0A075B6C2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav13-4-dv7A0A075B6C2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav13-4-dv7A0A075B6C2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav13-4-dv7A0A075B6C2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav13-4-dv7A0A075B6C2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Trav13-4-dv7A0A075B6C2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Trav13-4-dv7A0A075B6C2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav13-4-dv7A0A075B6C2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav13-4-dv7A0A075B6C2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav13-4-dv7A0A075B6C2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav13-4-dv7A0A075B6C2 Gm25238-201ENSMUST00000174914 89 ntBASIC18.38■□□□□ 0.53
Trav13-4-dv7A0A075B6C2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav13-4-dv7A0A075B6C2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.37■□□□□ 0.53
Trav13-4-dv7A0A075B6C2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.36■□□□□ 0.53
Trav13-4-dv7A0A075B6C2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav13-4-dv7A0A075B6C2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trav13-4-dv7A0A075B6C2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav13-4-dv7A0A075B6C2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.33■□□□□ 0.52
Trav13-4-dv7A0A075B6C2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav13-4-dv7A0A075B6C2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav13-4-dv7A0A075B6C2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav13-4-dv7A0A075B6C2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav13-4-dv7A0A075B6C2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trav13-4-dv7A0A075B6C2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC18.28■□□□□ 0.52
Trav13-4-dv7A0A075B6C2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav13-4-dv7A0A075B6C2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Trav13-4-dv7A0A075B6C2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.2■□□□□ 0.5
Trav13-4-dv7A0A075B6C2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav13-4-dv7A0A075B6C2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trav13-4-dv7A0A075B6C2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav13-4-dv7A0A075B6C2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav13-4-dv7A0A075B6C2 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.14■□□□□ 0.5
Trav13-4-dv7A0A075B6C2 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.13■□□□□ 0.49
Trav13-4-dv7A0A075B6C2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18.13■□□□□ 0.49
Trav13-4-dv7A0A075B6C2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav13-4-dv7A0A075B6C2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav13-4-dv7A0A075B6C2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav13-4-dv7A0A075B6C2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav13-4-dv7A0A075B6C2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav13-4-dv7A0A075B6C2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav13-4-dv7A0A075B6C2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.06■□□□□ 0.48
Trav13-4-dv7A0A075B6C2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav13-4-dv7A0A075B6C2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav13-4-dv7A0A075B6C2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav13-4-dv7A0A075B6C2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trav13-4-dv7A0A075B6C2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav13-4-dv7A0A075B6C2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav13-4-dv7A0A075B6C2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav13-4-dv7A0A075B6C2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav13-4-dv7A0A075B6C2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav13-4-dv7A0A075B6C2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav13-4-dv7A0A075B6C2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav13-4-dv7A0A075B6C2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Trav13-4-dv7A0A075B6C2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav13-4-dv7A0A075B6C2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav13-4-dv7A0A075B6C2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav13-4-dv7A0A075B6C2 Gm6658-202ENSMUST00000209493 1885 ntBASIC17.97■□□□□ 0.47
Trav13-4-dv7A0A075B6C2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav13-4-dv7A0A075B6C2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav13-4-dv7A0A075B6C2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.94■□□□□ 0.46
Trav13-4-dv7A0A075B6C2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav13-4-dv7A0A075B6C2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13-4-dv7A0A075B6C2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13-4-dv7A0A075B6C2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav13-4-dv7A0A075B6C2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav13-4-dv7A0A075B6C2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav13-4-dv7A0A075B6C2 Rab21-202ENSMUST00000218831 843 ntBASIC17.88■□□□□ 0.45
Trav13-4-dv7A0A075B6C2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13-4-dv7A0A075B6C2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.87■□□□□ 0.45
Trav13-4-dv7A0A075B6C2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13-4-dv7A0A075B6C2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav13-4-dv7A0A075B6C2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC17.86■□□□□ 0.45
Trav13-4-dv7A0A075B6C2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.85■□□□□ 0.45
Trav13-4-dv7A0A075B6C2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13-4-dv7A0A075B6C2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav13-4-dv7A0A075B6C2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trav13-4-dv7A0A075B6C2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav13-4-dv7A0A075B6C2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav13-4-dv7A0A075B6C2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav13-4-dv7A0A075B6C2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav13-4-dv7A0A075B6C2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav13-4-dv7A0A075B6C2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trav13-4-dv7A0A075B6C2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Trav13-4-dv7A0A075B6C2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trav13-4-dv7A0A075B6C2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav13-4-dv7A0A075B6C2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav13-4-dv7A0A075B6C2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav13-4-dv7A0A075B6C2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav13-4-dv7A0A075B6C2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav13-4-dv7A0A075B6C2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav13-4-dv7A0A075B6C2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms