Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trdv1A0A075B657 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trdv1A0A075B657 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Trdv1A0A075B657 Gm27325-201ENSMUST00000175467 74 ntBASIC20.79■□□□□ 0.92
Trdv1A0A075B657 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Trdv1A0A075B657 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.77■□□□□ 0.92
Trdv1A0A075B657 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trdv1A0A075B657 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trdv1A0A075B657 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trdv1A0A075B657 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trdv1A0A075B657 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Trdv1A0A075B657 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trdv1A0A075B657 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trdv1A0A075B657 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.6■□□□□ 0.89
Trdv1A0A075B657 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trdv1A0A075B657 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trdv1A0A075B657 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trdv1A0A075B657 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trdv1A0A075B657 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trdv1A0A075B657 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trdv1A0A075B657 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Trdv1A0A075B657 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trdv1A0A075B657 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.5■□□□□ 0.87
Trdv1A0A075B657 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.49■□□□□ 0.87
Trdv1A0A075B657 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trdv1A0A075B657 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trdv1A0A075B657 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.41■□□□□ 0.86
Trdv1A0A075B657 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trdv1A0A075B657 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trdv1A0A075B657 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trdv1A0A075B657 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.39■□□□□ 0.85
Trdv1A0A075B657 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trdv1A0A075B657 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trdv1A0A075B657 Gm25238-201ENSMUST00000174914 89 ntBASIC20.34■□□□□ 0.85
Trdv1A0A075B657 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.32■□□□□ 0.84
Trdv1A0A075B657 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.31■□□□□ 0.84
Trdv1A0A075B657 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.3■□□□□ 0.84
Trdv1A0A075B657 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trdv1A0A075B657 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trdv1A0A075B657 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.27■□□□□ 0.84
Trdv1A0A075B657 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.27■□□□□ 0.84
Trdv1A0A075B657 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trdv1A0A075B657 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trdv1A0A075B657 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trdv1A0A075B657 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trdv1A0A075B657 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trdv1A0A075B657 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trdv1A0A075B657 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trdv1A0A075B657 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trdv1A0A075B657 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.18■□□□□ 0.82
Trdv1A0A075B657 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.18■□□□□ 0.82
Trdv1A0A075B657 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Trdv1A0A075B657 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trdv1A0A075B657 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trdv1A0A075B657 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trdv1A0A075B657 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trdv1A0A075B657 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.11■□□□□ 0.81
Trdv1A0A075B657 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.08■□□□□ 0.81
Trdv1A0A075B657 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trdv1A0A075B657 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trdv1A0A075B657 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Trdv1A0A075B657 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trdv1A0A075B657 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trdv1A0A075B657 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trdv1A0A075B657 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trdv1A0A075B657 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trdv1A0A075B657 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trdv1A0A075B657 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.99■□□□□ 0.79
Trdv1A0A075B657 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Trdv1A0A075B657 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trdv1A0A075B657 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trdv1A0A075B657 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trdv1A0A075B657 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trdv1A0A075B657 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trdv1A0A075B657 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trdv1A0A075B657 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.94■□□□□ 0.78
Trdv1A0A075B657 Rab21-202ENSMUST00000218831 843 ntBASIC19.94■□□□□ 0.78
Trdv1A0A075B657 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trdv1A0A075B657 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.93■□□□□ 0.78
Trdv1A0A075B657 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.93■□□□□ 0.78
Trdv1A0A075B657 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.92■□□□□ 0.78
Trdv1A0A075B657 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trdv1A0A075B657 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trdv1A0A075B657 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trdv1A0A075B657 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trdv1A0A075B657 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trdv1A0A075B657 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trdv1A0A075B657 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Trdv1A0A075B657 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trdv1A0A075B657 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trdv1A0A075B657 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trdv1A0A075B657 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trdv1A0A075B657 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trdv1A0A075B657 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trdv1A0A075B657 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trdv1A0A075B657 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trdv1A0A075B657 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trdv1A0A075B657 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trdv1A0A075B657 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.77■□□□□ 0.76
Trdv1A0A075B657 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms