Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Trav17A0A075B655 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav17A0A075B655 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trav17A0A075B655 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav17A0A075B655 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trav17A0A075B655 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.58■■□□□ 1.05
Trav17A0A075B655 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trav17A0A075B655 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trav17A0A075B655 Gm27325-201ENSMUST00000175467 74 ntBASIC21.54■■□□□ 1.04
Trav17A0A075B655 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trav17A0A075B655 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trav17A0A075B655 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trav17A0A075B655 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Trav17A0A075B655 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav17A0A075B655 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trav17A0A075B655 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trav17A0A075B655 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.38■■□□□ 1.01
Trav17A0A075B655 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trav17A0A075B655 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav17A0A075B655 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.31■■□□□ 1
Trav17A0A075B655 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trav17A0A075B655 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.3■■□□□ 1
Trav17A0A075B655 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trav17A0A075B655 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.26■□□□□ 0.99
Trav17A0A075B655 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.22■□□□□ 0.99
Trav17A0A075B655 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav17A0A075B655 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav17A0A075B655 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav17A0A075B655 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav17A0A075B655 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trav17A0A075B655 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.17■□□□□ 0.98
Trav17A0A075B655 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trav17A0A075B655 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.14■□□□□ 0.97
Trav17A0A075B655 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trav17A0A075B655 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trav17A0A075B655 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.13■□□□□ 0.97
Trav17A0A075B655 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trav17A0A075B655 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trav17A0A075B655 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Trav17A0A075B655 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.09■□□□□ 0.97
Trav17A0A075B655 Gm25238-201ENSMUST00000174914 89 ntBASIC21.07■□□□□ 0.96
Trav17A0A075B655 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trav17A0A075B655 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trav17A0A075B655 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav17A0A075B655 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav17A0A075B655 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trav17A0A075B655 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.03■□□□□ 0.96
Trav17A0A075B655 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.02■□□□□ 0.96
Trav17A0A075B655 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.01■□□□□ 0.95
Trav17A0A075B655 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Trav17A0A075B655 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trav17A0A075B655 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trav17A0A075B655 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.98■□□□□ 0.95
Trav17A0A075B655 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trav17A0A075B655 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav17A0A075B655 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Trav17A0A075B655 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav17A0A075B655 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav17A0A075B655 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.86■□□□□ 0.93
Trav17A0A075B655 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav17A0A075B655 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trav17A0A075B655 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trav17A0A075B655 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trav17A0A075B655 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav17A0A075B655 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trav17A0A075B655 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav17A0A075B655 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav17A0A075B655 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Trav17A0A075B655 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trav17A0A075B655 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav17A0A075B655 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav17A0A075B655 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.79■□□□□ 0.92
Trav17A0A075B655 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Trav17A0A075B655 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.76■□□□□ 0.91
Trav17A0A075B655 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Trav17A0A075B655 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav17A0A075B655 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.71■□□□□ 0.91
Trav17A0A075B655 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Trav17A0A075B655 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav17A0A075B655 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.68■□□□□ 0.9
Trav17A0A075B655 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trav17A0A075B655 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.66■□□□□ 0.9
Trav17A0A075B655 Rab21-202ENSMUST00000218831 843 ntBASIC20.66■□□□□ 0.9
Trav17A0A075B655 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav17A0A075B655 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav17A0A075B655 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav17A0A075B655 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav17A0A075B655 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav17A0A075B655 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav17A0A075B655 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav17A0A075B655 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav17A0A075B655 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav17A0A075B655 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.62■□□□□ 0.89
Trav17A0A075B655 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav17A0A075B655 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trav17A0A075B655 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav17A0A075B655 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav17A0A075B655 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav17A0A075B655 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Trav17A0A075B655 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms