Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav3-4A0A075B654 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav3-4A0A075B654 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav3-4A0A075B654 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav3-4A0A075B654 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trav3-4A0A075B654 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trav3-4A0A075B654 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav3-4A0A075B654 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav3-4A0A075B654 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav3-4A0A075B654 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav3-4A0A075B654 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav3-4A0A075B654 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav3-4A0A075B654 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav3-4A0A075B654 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav3-4A0A075B654 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav3-4A0A075B654 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav3-4A0A075B654 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav3-4A0A075B654 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav3-4A0A075B654 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav3-4A0A075B654 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav3-4A0A075B654 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav3-4A0A075B654 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav3-4A0A075B654 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav3-4A0A075B654 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav3-4A0A075B654 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav3-4A0A075B654 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav3-4A0A075B654 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav3-4A0A075B654 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav3-4A0A075B654 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trav3-4A0A075B654 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav3-4A0A075B654 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav3-4A0A075B654 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav3-4A0A075B654 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav3-4A0A075B654 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav3-4A0A075B654 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav3-4A0A075B654 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trav3-4A0A075B654 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav3-4A0A075B654 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav3-4A0A075B654 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav3-4A0A075B654 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav3-4A0A075B654 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav3-4A0A075B654 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav3-4A0A075B654 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Trav3-4A0A075B654 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav3-4A0A075B654 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav3-4A0A075B654 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav3-4A0A075B654 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav3-4A0A075B654 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trav3-4A0A075B654 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav3-4A0A075B654 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trav3-4A0A075B654 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav3-4A0A075B654 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav3-4A0A075B654 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav3-4A0A075B654 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav3-4A0A075B654 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav3-4A0A075B654 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav3-4A0A075B654 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav3-4A0A075B654 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trav3-4A0A075B654 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav3-4A0A075B654 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav3-4A0A075B654 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.56■□□□□ 0.4
Trav3-4A0A075B654 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav3-4A0A075B654 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav3-4A0A075B654 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav3-4A0A075B654 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav3-4A0A075B654 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav3-4A0A075B654 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav3-4A0A075B654 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trav3-4A0A075B654 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav3-4A0A075B654 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav3-4A0A075B654 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Trav3-4A0A075B654 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav3-4A0A075B654 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav3-4A0A075B654 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav3-4A0A075B654 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav3-4A0A075B654 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Trav3-4A0A075B654 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav3-4A0A075B654 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav3-4A0A075B654 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trav3-4A0A075B654 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav3-4A0A075B654 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trav3-4A0A075B654 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav3-4A0A075B654 Gm2415-204ENSMUST00000190235 2004 ntBASIC17.4■□□□□ 0.38
Trav3-4A0A075B654 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav3-4A0A075B654 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trav3-4A0A075B654 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav3-4A0A075B654 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav3-4A0A075B654 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.37■□□□□ 0.37
Trav3-4A0A075B654 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav3-4A0A075B654 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav3-4A0A075B654 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav3-4A0A075B654 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trav3-4A0A075B654 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav3-4A0A075B654 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav3-4A0A075B654 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav3-4A0A075B654 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav3-4A0A075B654 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav3-4A0A075B654 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav3-4A0A075B654 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav3-4A0A075B654 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms