Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav16nA0A075B634 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.52■□□□□ 0.88
Trav16nA0A075B634 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav16nA0A075B634 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav16nA0A075B634 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav16nA0A075B634 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav16nA0A075B634 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav16nA0A075B634 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav16nA0A075B634 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav16nA0A075B634 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.37■□□□□ 0.85
Trav16nA0A075B634 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav16nA0A075B634 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trav16nA0A075B634 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav16nA0A075B634 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trav16nA0A075B634 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav16nA0A075B634 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trav16nA0A075B634 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.27■□□□□ 0.84
Trav16nA0A075B634 Gm27325-201ENSMUST00000175467 74 ntBASIC20.25■□□□□ 0.83
Trav16nA0A075B634 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav16nA0A075B634 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav16nA0A075B634 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.21■□□□□ 0.83
Trav16nA0A075B634 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trav16nA0A075B634 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav16nA0A075B634 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.15■□□□□ 0.82
Trav16nA0A075B634 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trav16nA0A075B634 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav16nA0A075B634 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav16nA0A075B634 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav16nA0A075B634 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav16nA0A075B634 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav16nA0A075B634 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.02■□□□□ 0.8
Trav16nA0A075B634 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav16nA0A075B634 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav16nA0A075B634 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav16nA0A075B634 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav16nA0A075B634 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.98■□□□□ 0.79
Trav16nA0A075B634 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav16nA0A075B634 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.97■□□□□ 0.79
Trav16nA0A075B634 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav16nA0A075B634 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav16nA0A075B634 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav16nA0A075B634 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav16nA0A075B634 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav16nA0A075B634 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav16nA0A075B634 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.9■□□□□ 0.78
Trav16nA0A075B634 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.9■□□□□ 0.78
Trav16nA0A075B634 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trav16nA0A075B634 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav16nA0A075B634 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.87■□□□□ 0.77
Trav16nA0A075B634 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav16nA0A075B634 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav16nA0A075B634 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.84■□□□□ 0.77
Trav16nA0A075B634 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav16nA0A075B634 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trav16nA0A075B634 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav16nA0A075B634 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav16nA0A075B634 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav16nA0A075B634 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Trav16nA0A075B634 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav16nA0A075B634 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav16nA0A075B634 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav16nA0A075B634 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.76■□□□□ 0.75
Trav16nA0A075B634 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav16nA0A075B634 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav16nA0A075B634 Gm25238-201ENSMUST00000174914 89 ntBASIC19.74■□□□□ 0.75
Trav16nA0A075B634 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trav16nA0A075B634 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav16nA0A075B634 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trav16nA0A075B634 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav16nA0A075B634 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav16nA0A075B634 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.7■□□□□ 0.74
Trav16nA0A075B634 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav16nA0A075B634 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav16nA0A075B634 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.69■□□□□ 0.74
Trav16nA0A075B634 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav16nA0A075B634 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav16nA0A075B634 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav16nA0A075B634 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.67■□□□□ 0.74
Trav16nA0A075B634 Zxda-201ENSMUST00000117281 2621 ntBASIC19.67■□□□□ 0.74
Trav16nA0A075B634 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav16nA0A075B634 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.63■□□□□ 0.73
Trav16nA0A075B634 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.63■□□□□ 0.73
Trav16nA0A075B634 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav16nA0A075B634 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav16nA0A075B634 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav16nA0A075B634 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav16nA0A075B634 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trav16nA0A075B634 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Trav16nA0A075B634 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav16nA0A075B634 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav16nA0A075B634 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav16nA0A075B634 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.52■□□□□ 0.72
Trav16nA0A075B634 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav16nA0A075B634 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav16nA0A075B634 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trav16nA0A075B634 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav16nA0A075B634 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav16nA0A075B634 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav16nA0A075B634 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav16nA0A075B634 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms