Protein–RNA interactions for Protein: Q9QZS8

Sh2d3c, SH2 domain-containing protein 3C, mousemouse

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d3cQ9QZS8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh2d3cQ9QZS8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Sh2d3cQ9QZS8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Sh2d3cQ9QZS8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh2d3cQ9QZS8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sh2d3cQ9QZS8 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh2d3cQ9QZS8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sh2d3cQ9QZS8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sh2d3cQ9QZS8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.64■□□□□ 0.9
Sh2d3cQ9QZS8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sh2d3cQ9QZS8 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.64■□□□□ 0.89
Sh2d3cQ9QZS8 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.64■□□□□ 0.89
Sh2d3cQ9QZS8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sh2d3cQ9QZS8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Sh2d3cQ9QZS8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d3cQ9QZS8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d3cQ9QZS8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d3cQ9QZS8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d3cQ9QZS8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.63■□□□□ 0.89
Sh2d3cQ9QZS8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d3cQ9QZS8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh2d3cQ9QZS8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Sh2d3cQ9QZS8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d3cQ9QZS8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.62■□□□□ 0.89
Sh2d3cQ9QZS8 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.62■□□□□ 0.89
Sh2d3cQ9QZS8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sh2d3cQ9QZS8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh2d3cQ9QZS8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh2d3cQ9QZS8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
Sh2d3cQ9QZS8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh2d3cQ9QZS8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh2d3cQ9QZS8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Sh2d3cQ9QZS8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Sh2d3cQ9QZS8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Sh2d3cQ9QZS8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d3cQ9QZS8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.59■□□□□ 0.89
Sh2d3cQ9QZS8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d3cQ9QZS8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d3cQ9QZS8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.59■□□□□ 0.89
Sh2d3cQ9QZS8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d3cQ9QZS8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d3cQ9QZS8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh2d3cQ9QZS8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sh2d3cQ9QZS8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Sh2d3cQ9QZS8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Sh2d3cQ9QZS8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Sh2d3cQ9QZS8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.58■□□□□ 0.89
Sh2d3cQ9QZS8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh2d3cQ9QZS8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh2d3cQ9QZS8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sh2d3cQ9QZS8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.57■□□□□ 0.88
Sh2d3cQ9QZS8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh2d3cQ9QZS8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh2d3cQ9QZS8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Sh2d3cQ9QZS8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2d3cQ9QZS8 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.56■□□□□ 0.88
Sh2d3cQ9QZS8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2d3cQ9QZS8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.56■□□□□ 0.88
Sh2d3cQ9QZS8 Gm4799-201ENSMUST00000095396 657 ntBASIC20.56■□□□□ 0.88
Sh2d3cQ9QZS8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2d3cQ9QZS8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Sh2d3cQ9QZS8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2d3cQ9QZS8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Sh2d3cQ9QZS8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2d3cQ9QZS8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2d3cQ9QZS8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Sh2d3cQ9QZS8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Sh2d3cQ9QZS8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2d3cQ9QZS8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.55■□□□□ 0.88
Sh2d3cQ9QZS8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2d3cQ9QZS8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2d3cQ9QZS8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2d3cQ9QZS8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Sh2d3cQ9QZS8 Golph3-202ENSMUST00000226517 2359 ntBASIC20.54■□□□□ 0.88
Sh2d3cQ9QZS8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2d3cQ9QZS8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2d3cQ9QZS8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2d3cQ9QZS8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2d3cQ9QZS8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2d3cQ9QZS8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh2d3cQ9QZS8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh2d3cQ9QZS8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh2d3cQ9QZS8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d3cQ9QZS8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Sh2d3cQ9QZS8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Sh2d3cQ9QZS8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Sh2d3cQ9QZS8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d3cQ9QZS8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d3cQ9QZS8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d3cQ9QZS8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d3cQ9QZS8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Sh2d3cQ9QZS8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.5■□□□□ 0.87
Sh2d3cQ9QZS8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2d3cQ9QZS8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2d3cQ9QZS8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Sh2d3cQ9QZS8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2d3cQ9QZS8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2d3cQ9QZS8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.5■□□□□ 0.87
Sh2d3cQ9QZS8 Gm6311-201ENSMUST00000073790 878 ntBASIC20.5■□□□□ 0.87
Sh2d3cQ9QZS8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms