Protein–RNA interactions for Protein: Q9JJ94

Ssna1, Sjoegren syndrome nuclear autoantigen 1 homolog, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssna1Q9JJ94 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssna1Q9JJ94 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssna1Q9JJ94 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ssna1Q9JJ94 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ssna1Q9JJ94 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssna1Q9JJ94 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.43■□□□□ 0.38
Ssna1Q9JJ94 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ssna1Q9JJ94 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssna1Q9JJ94 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssna1Q9JJ94 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ssna1Q9JJ94 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ssna1Q9JJ94 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ssna1Q9JJ94 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.41■□□□□ 0.38
Ssna1Q9JJ94 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssna1Q9JJ94 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssna1Q9JJ94 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Ssna1Q9JJ94 Gm27322-201ENSMUST00000184007 104 ntBASIC17.41■□□□□ 0.38
Ssna1Q9JJ94 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssna1Q9JJ94 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssna1Q9JJ94 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ssna1Q9JJ94 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ssna1Q9JJ94 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssna1Q9JJ94 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssna1Q9JJ94 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssna1Q9JJ94 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssna1Q9JJ94 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ssna1Q9JJ94 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ssna1Q9JJ94 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ssna1Q9JJ94 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ssna1Q9JJ94 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ssna1Q9JJ94 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssna1Q9JJ94 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Ssna1Q9JJ94 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
Ssna1Q9JJ94 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ssna1Q9JJ94 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ssna1Q9JJ94 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.39■□□□□ 0.37
Ssna1Q9JJ94 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ssna1Q9JJ94 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Ssna1Q9JJ94 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssna1Q9JJ94 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Ssna1Q9JJ94 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssna1Q9JJ94 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Ssna1Q9JJ94 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssna1Q9JJ94 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssna1Q9JJ94 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssna1Q9JJ94 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ssna1Q9JJ94 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssna1Q9JJ94 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ssna1Q9JJ94 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssna1Q9JJ94 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ssna1Q9JJ94 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssna1Q9JJ94 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssna1Q9JJ94 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssna1Q9JJ94 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssna1Q9JJ94 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ssna1Q9JJ94 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Ssna1Q9JJ94 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.35■□□□□ 0.37
Ssna1Q9JJ94 Golph3-202ENSMUST00000226517 2359 ntBASIC17.35■□□□□ 0.37
Ssna1Q9JJ94 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ssna1Q9JJ94 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssna1Q9JJ94 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.35■□□□□ 0.37
Ssna1Q9JJ94 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Ssna1Q9JJ94 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssna1Q9JJ94 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ssna1Q9JJ94 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ssna1Q9JJ94 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssna1Q9JJ94 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssna1Q9JJ94 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssna1Q9JJ94 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssna1Q9JJ94 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssna1Q9JJ94 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssna1Q9JJ94 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ssna1Q9JJ94 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ssna1Q9JJ94 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ssna1Q9JJ94 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssna1Q9JJ94 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.33■□□□□ 0.36
Ssna1Q9JJ94 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssna1Q9JJ94 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Ssna1Q9JJ94 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssna1Q9JJ94 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssna1Q9JJ94 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ssna1Q9JJ94 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ssna1Q9JJ94 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssna1Q9JJ94 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssna1Q9JJ94 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssna1Q9JJ94 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssna1Q9JJ94 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssna1Q9JJ94 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssna1Q9JJ94 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssna1Q9JJ94 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ssna1Q9JJ94 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssna1Q9JJ94 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssna1Q9JJ94 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.31■□□□□ 0.36
Ssna1Q9JJ94 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssna1Q9JJ94 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssna1Q9JJ94 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ssna1Q9JJ94 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssna1Q9JJ94 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssna1Q9JJ94 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssna1Q9JJ94 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms