Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mbd3l1Q9D9H3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mbd3l1Q9D9H3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mbd3l1Q9D9H3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mbd3l1Q9D9H3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Mbd3l1Q9D9H3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mbd3l1Q9D9H3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mbd3l1Q9D9H3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mbd3l1Q9D9H3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mbd3l1Q9D9H3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mbd3l1Q9D9H3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mbd3l1Q9D9H3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Mbd3l1Q9D9H3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Mbd3l1Q9D9H3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mbd3l1Q9D9H3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mbd3l1Q9D9H3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mbd3l1Q9D9H3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.46■□□□□ 0.55
Mbd3l1Q9D9H3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Mbd3l1Q9D9H3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Mbd3l1Q9D9H3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mbd3l1Q9D9H3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mbd3l1Q9D9H3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Mbd3l1Q9D9H3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.45■□□□□ 0.54
Mbd3l1Q9D9H3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mbd3l1Q9D9H3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mbd3l1Q9D9H3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mbd3l1Q9D9H3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mbd3l1Q9D9H3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mbd3l1Q9D9H3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mbd3l1Q9D9H3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.44■□□□□ 0.54
Mbd3l1Q9D9H3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mbd3l1Q9D9H3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mbd3l1Q9D9H3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mbd3l1Q9D9H3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mbd3l1Q9D9H3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mbd3l1Q9D9H3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Mbd3l1Q9D9H3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mbd3l1Q9D9H3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mbd3l1Q9D9H3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mbd3l1Q9D9H3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mbd3l1Q9D9H3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mbd3l1Q9D9H3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Mbd3l1Q9D9H3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mbd3l1Q9D9H3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.43■□□□□ 0.54
Mbd3l1Q9D9H3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mbd3l1Q9D9H3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mbd3l1Q9D9H3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Mbd3l1Q9D9H3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mbd3l1Q9D9H3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Mbd3l1Q9D9H3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Mbd3l1Q9D9H3 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.42■□□□□ 0.54
Mbd3l1Q9D9H3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mbd3l1Q9D9H3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.42■□□□□ 0.54
Mbd3l1Q9D9H3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mbd3l1Q9D9H3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Mbd3l1Q9D9H3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mbd3l1Q9D9H3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mbd3l1Q9D9H3 Gm30023-201ENSMUST00000197970 889 ntBASIC18.41■□□□□ 0.54
Mbd3l1Q9D9H3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Mbd3l1Q9D9H3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mbd3l1Q9D9H3 Gm26115-201ENSMUST00000175605 87 ntBASIC18.4■□□□□ 0.54
Mbd3l1Q9D9H3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mbd3l1Q9D9H3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mbd3l1Q9D9H3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.4■□□□□ 0.54
Mbd3l1Q9D9H3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mbd3l1Q9D9H3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mbd3l1Q9D9H3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Mbd3l1Q9D9H3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Mbd3l1Q9D9H3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mbd3l1Q9D9H3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Mbd3l1Q9D9H3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Mbd3l1Q9D9H3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.39■□□□□ 0.53
Mbd3l1Q9D9H3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mbd3l1Q9D9H3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Mbd3l1Q9D9H3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mbd3l1Q9D9H3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mbd3l1Q9D9H3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.38■□□□□ 0.53
Mbd3l1Q9D9H3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mbd3l1Q9D9H3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mbd3l1Q9D9H3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mbd3l1Q9D9H3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mbd3l1Q9D9H3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mbd3l1Q9D9H3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Mbd3l1Q9D9H3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.37■□□□□ 0.53
Mbd3l1Q9D9H3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mbd3l1Q9D9H3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mbd3l1Q9D9H3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Mbd3l1Q9D9H3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Mbd3l1Q9D9H3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.35■□□□□ 0.53
Mbd3l1Q9D9H3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mbd3l1Q9D9H3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mbd3l1Q9D9H3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Mbd3l1Q9D9H3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mbd3l1Q9D9H3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mbd3l1Q9D9H3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.35■□□□□ 0.53
Mbd3l1Q9D9H3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mbd3l1Q9D9H3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mbd3l1Q9D9H3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mbd3l1Q9D9H3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Mbd3l1Q9D9H3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms