Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC22.37■■□□□ 1.17
Cdh23Q99PF4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cdh23Q99PF4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.37■■□□□ 1.17
Cdh23Q99PF4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Cdh23Q99PF4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC22.37■■□□□ 1.17
Cdh23Q99PF4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC22.37■■□□□ 1.17
Cdh23Q99PF4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cdh23Q99PF4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Cdh23Q99PF4 Gm7291-201ENSMUST00000199147 382 ntBASIC22.36■■□□□ 1.17
Cdh23Q99PF4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cdh23Q99PF4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cdh23Q99PF4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cdh23Q99PF4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cdh23Q99PF4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Cdh23Q99PF4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cdh23Q99PF4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.35■■□□□ 1.17
Cdh23Q99PF4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Cdh23Q99PF4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.35■■□□□ 1.17
Cdh23Q99PF4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cdh23Q99PF4 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.33■■□□□ 1.17
Cdh23Q99PF4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cdh23Q99PF4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cdh23Q99PF4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cdh23Q99PF4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cdh23Q99PF4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cdh23Q99PF4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cdh23Q99PF4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cdh23Q99PF4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cdh23Q99PF4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cdh23Q99PF4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC22.32■■□□□ 1.16
Cdh23Q99PF4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cdh23Q99PF4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cdh23Q99PF4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cdh23Q99PF4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
Cdh23Q99PF4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC22.31■■□□□ 1.16
Cdh23Q99PF4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Cdh23Q99PF4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cdh23Q99PF4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cdh23Q99PF4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Cdh23Q99PF4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdh23Q99PF4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdh23Q99PF4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cdh23Q99PF4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC22.3■■□□□ 1.16
Cdh23Q99PF4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cdh23Q99PF4 Gm43017-201ENSMUST00000198296 752 ntBASIC22.29■■□□□ 1.16
Cdh23Q99PF4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cdh23Q99PF4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC22.29■■□□□ 1.16
Cdh23Q99PF4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.29■■□□□ 1.16
Cdh23Q99PF4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC22.29■■□□□ 1.16
Cdh23Q99PF4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cdh23Q99PF4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cdh23Q99PF4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cdh23Q99PF4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cdh23Q99PF4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cdh23Q99PF4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cdh23Q99PF4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cdh23Q99PF4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC22.27■■□□□ 1.16
Cdh23Q99PF4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cdh23Q99PF4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cdh23Q99PF4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.27■■□□□ 1.16
Cdh23Q99PF4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cdh23Q99PF4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Cdh23Q99PF4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cdh23Q99PF4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC22.27■■□□□ 1.16
Cdh23Q99PF4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cdh23Q99PF4 Gm9207-201ENSMUST00000198773 1115 ntBASIC22.26■■□□□ 1.15
Cdh23Q99PF4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cdh23Q99PF4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cdh23Q99PF4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Cdh23Q99PF4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Cdh23Q99PF4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdh23Q99PF4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdh23Q99PF4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.25■■□□□ 1.15
Cdh23Q99PF4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdh23Q99PF4 Gm27405-201ENSMUST00000184201 112 ntBASIC22.25■■□□□ 1.15
Cdh23Q99PF4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdh23Q99PF4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cdh23Q99PF4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Cdh23Q99PF4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.24■■□□□ 1.15
Cdh23Q99PF4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cdh23Q99PF4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cdh23Q99PF4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Cdh23Q99PF4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.23■■□□□ 1.15
Cdh23Q99PF4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Cdh23Q99PF4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cdh23Q99PF4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
Cdh23Q99PF4 Gm37179-201ENSMUST00000194862 823 ntBASIC22.23■■□□□ 1.15
Cdh23Q99PF4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC22.22■■□□□ 1.15
Cdh23Q99PF4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cdh23Q99PF4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cdh23Q99PF4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cdh23Q99PF4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC22.22■■□□□ 1.15
Cdh23Q99PF4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Cdh23Q99PF4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cdh23Q99PF4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cdh23Q99PF4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cdh23Q99PF4 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.21■■□□□ 1.15
Cdh23Q99PF4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
Cdh23Q99PF4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cdh23Q99PF4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms