Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm9847-201ENSMUST00000052528 599 ntBASIC26.8■■□□□ 1.88
Trim52Q8CDV4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Trim52Q8CDV4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Trim52Q8CDV4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Trim52Q8CDV4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
Trim52Q8CDV4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Trim52Q8CDV4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Trim52Q8CDV4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.78■■□□□ 1.88
Trim52Q8CDV4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Trim52Q8CDV4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Trim52Q8CDV4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Trim52Q8CDV4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trim52Q8CDV4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
Trim52Q8CDV4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trim52Q8CDV4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC26.77■■□□□ 1.88
Trim52Q8CDV4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC26.77■■□□□ 1.88
Trim52Q8CDV4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trim52Q8CDV4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trim52Q8CDV4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trim52Q8CDV4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC26.76■■□□□ 1.87
Trim52Q8CDV4 Gm12922-201ENSMUST00000120626 809 ntBASIC26.76■■□□□ 1.87
Trim52Q8CDV4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC26.76■■□□□ 1.87
Trim52Q8CDV4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Trim52Q8CDV4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC26.75■■□□□ 1.87
Trim52Q8CDV4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Trim52Q8CDV4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC26.75■■□□□ 1.87
Trim52Q8CDV4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
Trim52Q8CDV4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Trim52Q8CDV4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC26.74■■□□□ 1.87
Trim52Q8CDV4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC26.74■■□□□ 1.87
Trim52Q8CDV4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC26.74■■□□□ 1.87
Trim52Q8CDV4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Trim52Q8CDV4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Trim52Q8CDV4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Trim52Q8CDV4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Trim52Q8CDV4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Trim52Q8CDV4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Trim52Q8CDV4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
Trim52Q8CDV4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Trim52Q8CDV4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Trim52Q8CDV4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC26.72■■□□□ 1.87
Trim52Q8CDV4 Gm43034-201ENSMUST00000198678 1364 ntBASIC26.72■■□□□ 1.87
Trim52Q8CDV4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
Trim52Q8CDV4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Trim52Q8CDV4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
Trim52Q8CDV4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Trim52Q8CDV4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Trim52Q8CDV4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Trim52Q8CDV4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Trim52Q8CDV4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Trim52Q8CDV4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Trim52Q8CDV4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Trim52Q8CDV4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
Trim52Q8CDV4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Trim52Q8CDV4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Trim52Q8CDV4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Trim52Q8CDV4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Trim52Q8CDV4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Trim52Q8CDV4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Trim52Q8CDV4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 AC116713.1-201ENSMUST00000215074 430 ntBASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC26.68■■□□□ 1.86
Trim52Q8CDV4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC26.68■■□□□ 1.86
Trim52Q8CDV4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trim52Q8CDV4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trim52Q8CDV4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trim52Q8CDV4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
Trim52Q8CDV4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Trim52Q8CDV4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC26.67■■□□□ 1.86
Trim52Q8CDV4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Trim52Q8CDV4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC26.66■■□□□ 1.86
Trim52Q8CDV4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC26.66■■□□□ 1.86
Trim52Q8CDV4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trim52Q8CDV4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
Trim52Q8CDV4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC26.65■■□□□ 1.86
Trim52Q8CDV4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim52Q8CDV4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Trim52Q8CDV4 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.65■■□□□ 1.86
Trim52Q8CDV4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim52Q8CDV4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim52Q8CDV4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim52Q8CDV4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim52Q8CDV4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
Trim52Q8CDV4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Trim52Q8CDV4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC26.64■■□□□ 1.85
Trim52Q8CDV4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC26.64■■□□□ 1.85
Trim52Q8CDV4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Trim52Q8CDV4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC26.63■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms