Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim4Q8C1Q6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim4Q8C1Q6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.82■□□□□ 0.44
Smim4Q8C1Q6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim4Q8C1Q6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim4Q8C1Q6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smim4Q8C1Q6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Smim4Q8C1Q6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smim4Q8C1Q6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
Smim4Q8C1Q6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Smim4Q8C1Q6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smim4Q8C1Q6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smim4Q8C1Q6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.81■□□□□ 0.44
Smim4Q8C1Q6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.81■□□□□ 0.44
Smim4Q8C1Q6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.81■□□□□ 0.44
Smim4Q8C1Q6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smim4Q8C1Q6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smim4Q8C1Q6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smim4Q8C1Q6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smim4Q8C1Q6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smim4Q8C1Q6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smim4Q8C1Q6 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.79■□□□□ 0.44
Smim4Q8C1Q6 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.79■□□□□ 0.44
Smim4Q8C1Q6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smim4Q8C1Q6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smim4Q8C1Q6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smim4Q8C1Q6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smim4Q8C1Q6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smim4Q8C1Q6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smim4Q8C1Q6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smim4Q8C1Q6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.79■□□□□ 0.44
Smim4Q8C1Q6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smim4Q8C1Q6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Smim4Q8C1Q6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Smim4Q8C1Q6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smim4Q8C1Q6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Smim4Q8C1Q6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smim4Q8C1Q6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smim4Q8C1Q6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Smim4Q8C1Q6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smim4Q8C1Q6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smim4Q8C1Q6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Smim4Q8C1Q6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.77■□□□□ 0.44
Smim4Q8C1Q6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smim4Q8C1Q6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Smim4Q8C1Q6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smim4Q8C1Q6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Smim4Q8C1Q6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smim4Q8C1Q6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smim4Q8C1Q6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smim4Q8C1Q6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smim4Q8C1Q6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Smim4Q8C1Q6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smim4Q8C1Q6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smim4Q8C1Q6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Smim4Q8C1Q6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim4Q8C1Q6 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim4Q8C1Q6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim4Q8C1Q6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim4Q8C1Q6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim4Q8C1Q6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim4Q8C1Q6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.75■□□□□ 0.43
Smim4Q8C1Q6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Smim4Q8C1Q6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smim4Q8C1Q6 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.75■□□□□ 0.43
Smim4Q8C1Q6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim4Q8C1Q6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim4Q8C1Q6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Smim4Q8C1Q6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Smim4Q8C1Q6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.74■□□□□ 0.43
Smim4Q8C1Q6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.74■□□□□ 0.43
Smim4Q8C1Q6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.73■□□□□ 0.43
Smim4Q8C1Q6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smim4Q8C1Q6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smim4Q8C1Q6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Smim4Q8C1Q6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Smim4Q8C1Q6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Smim4Q8C1Q6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.72■□□□□ 0.43
Smim4Q8C1Q6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim4Q8C1Q6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Smim4Q8C1Q6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Smim4Q8C1Q6 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.71■□□□□ 0.43
Smim4Q8C1Q6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Smim4Q8C1Q6 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.71■□□□□ 0.43
Smim4Q8C1Q6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.71■□□□□ 0.43
Smim4Q8C1Q6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Smim4Q8C1Q6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Smim4Q8C1Q6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smim4Q8C1Q6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smim4Q8C1Q6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Smim4Q8C1Q6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smim4Q8C1Q6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smim4Q8C1Q6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smim4Q8C1Q6 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.7■□□□□ 0.42
Smim4Q8C1Q6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smim4Q8C1Q6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Smim4Q8C1Q6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Smim4Q8C1Q6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Smim4Q8C1Q6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Smim4Q8C1Q6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms