Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrtm1Q8BXQ3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrtm1Q8BXQ3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lrtm1Q8BXQ3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Lrtm1Q8BXQ3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrtm1Q8BXQ3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrtm1Q8BXQ3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lrtm1Q8BXQ3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.66■□□□□ 0.58
Lrtm1Q8BXQ3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrtm1Q8BXQ3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrtm1Q8BXQ3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lrtm1Q8BXQ3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lrtm1Q8BXQ3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Lrtm1Q8BXQ3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Lrtm1Q8BXQ3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.65■□□□□ 0.58
Lrtm1Q8BXQ3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lrtm1Q8BXQ3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lrtm1Q8BXQ3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Lrtm1Q8BXQ3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.64■□□□□ 0.57
Lrtm1Q8BXQ3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.64■□□□□ 0.57
Lrtm1Q8BXQ3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.64■□□□□ 0.57
Lrtm1Q8BXQ3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lrtm1Q8BXQ3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lrtm1Q8BXQ3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.63■□□□□ 0.57
Lrtm1Q8BXQ3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lrtm1Q8BXQ3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lrtm1Q8BXQ3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lrtm1Q8BXQ3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lrtm1Q8BXQ3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrtm1Q8BXQ3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lrtm1Q8BXQ3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.62■□□□□ 0.57
Lrtm1Q8BXQ3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lrtm1Q8BXQ3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrtm1Q8BXQ3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrtm1Q8BXQ3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrtm1Q8BXQ3 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.62■□□□□ 0.57
Lrtm1Q8BXQ3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lrtm1Q8BXQ3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lrtm1Q8BXQ3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrtm1Q8BXQ3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrtm1Q8BXQ3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lrtm1Q8BXQ3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lrtm1Q8BXQ3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrtm1Q8BXQ3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrtm1Q8BXQ3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrtm1Q8BXQ3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Lrtm1Q8BXQ3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrtm1Q8BXQ3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrtm1Q8BXQ3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lrtm1Q8BXQ3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.6■□□□□ 0.57
Lrtm1Q8BXQ3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lrtm1Q8BXQ3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrtm1Q8BXQ3 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.59■□□□□ 0.57
Lrtm1Q8BXQ3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lrtm1Q8BXQ3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrtm1Q8BXQ3 Gm5812-201ENSMUST00000061073 957 ntBASIC18.59■□□□□ 0.57
Lrtm1Q8BXQ3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lrtm1Q8BXQ3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Lrtm1Q8BXQ3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lrtm1Q8BXQ3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Lrtm1Q8BXQ3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Lrtm1Q8BXQ3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.58■□□□□ 0.56
Lrtm1Q8BXQ3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lrtm1Q8BXQ3 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lrtm1Q8BXQ3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Lrtm1Q8BXQ3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lrtm1Q8BXQ3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lrtm1Q8BXQ3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lrtm1Q8BXQ3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lrtm1Q8BXQ3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lrtm1Q8BXQ3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Lrtm1Q8BXQ3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lrtm1Q8BXQ3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lrtm1Q8BXQ3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.56■□□□□ 0.56
Lrtm1Q8BXQ3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.56■□□□□ 0.56
Lrtm1Q8BXQ3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lrtm1Q8BXQ3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lrtm1Q8BXQ3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lrtm1Q8BXQ3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lrtm1Q8BXQ3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Lrtm1Q8BXQ3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Lrtm1Q8BXQ3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.56■□□□□ 0.56
Lrtm1Q8BXQ3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lrtm1Q8BXQ3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lrtm1Q8BXQ3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lrtm1Q8BXQ3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lrtm1Q8BXQ3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lrtm1Q8BXQ3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrtm1Q8BXQ3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrtm1Q8BXQ3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrtm1Q8BXQ3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lrtm1Q8BXQ3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrtm1Q8BXQ3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.55■□□□□ 0.56
Lrtm1Q8BXQ3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.55■□□□□ 0.56
Lrtm1Q8BXQ3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrtm1Q8BXQ3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrtm1Q8BXQ3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrtm1Q8BXQ3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrtm1Q8BXQ3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lrtm1Q8BXQ3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms